RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 GABRDO14764 452 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 CLASP2O75122 1294 aaKnown RBP12.6□□□□□ -0.39
GGA3-217ENST00000583667 TADA3O75528 432 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 KIF4AO95239 1232 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 BRD2P25440 801 aaKnown RBP12.6□□□□□ -0.39
GGA3-217ENST00000583667 MLH1P40692 756 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 RAP1GAPP47736 663 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 GABRB2P47870 512 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 SHC2P98077 582 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 CKAP4Q07065 602 aaKnown RBP12.6□□□□□ -0.39
GGA3-217ENST00000583667 SGO2Q562F6 1265 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 SCARA5Q6ZMJ2 495 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 RSRC2Q7L4I2 434 aaKnown RBP12.6□□□□□ -0.39
GGA3-217ENST00000583667 OTOP3Q7RTS5 596 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 DNAAF5Q86Y56 855 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 TMEM86AQ8N2M4 240 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 MRPL43Q8N983 215 aaKnown RBP12.6□□□□□ -0.39
GGA3-217ENST00000583667 APPL2Q8NEU8 664 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 KBTBD7Q8WVZ9 684 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 CPA5Q8WXQ8 436 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 ZNF653Q96CK0 615 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 CARD6Q9BX69 1037 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 PARVAQ9NVD7 372 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 TMEM161AQ9NX61 479 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 WDR35Q9P2L0 1181 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 AMFRQ9UKV5 643 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 LRFN2Q9ULH4 789 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 STRIP2Q9ULQ0 834 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 TTC7AQ9ULT0 858 aaPredicted RBP12.6□□□□□ -0.39
GGA3-217ENST00000583667 SMG5Q9UPR3 1016 aaKnown RBP12.6□□□□□ -0.39
GGA3-217ENST00000583667 ALG6Q9Y672 507 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 SCINQ9Y6U3 715 aa12.6□□□□□ -0.39
GGA3-217ENST00000583667 UQCRHLA0A096LP55 91 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 TBKBP1A7MCY6 615 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 HUS1O60921 280 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 CLSTN1O94985 981 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 CALCAP01258 141 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 UQCRHP07919 91 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 CD19P15391 556 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 RRM1P23921 792 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 GNL1P36915 607 aaPredicted RBP12.59□□□□□ -0.39
GGA3-217ENST00000583667 SLC1A1P43005 524 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 GPD2P43304 727 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 TUSC3Q13454 348 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 ZNF268Q14587 947 aaPredicted RBP12.59□□□□□ -0.39
GGA3-217ENST00000583667 UPP1Q16831 310 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 PKDCCQ504Y2 493 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 ZNF394Q53GI3 561 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 DCLRE1AQ6PJP8 1040 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 TMC7Q7Z402 723 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 PEX26Q7Z412 305 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 DAAM2Q86T65 1068 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 ERICH1Q86X53 443 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 TMEM130Q8N3G9 435 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 NETO1Q8TDF5 533 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 HEXIM2Q96MH2 286 aaKnown RBP12.59□□□□□ -0.39
GGA3-217ENST00000583667 MRPL45Q9BRJ2 306 aaKnown RBP12.59□□□□□ -0.39
GGA3-217ENST00000583667 NUP85Q9BW27 656 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 MIS12Q9H081 205 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 EPC1Q9H2F5 836 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 CWH43Q9H720 699 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 CYLDQ9NQC7 956 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 IGSF9Q9P2J2 1179 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 ZMIZ1Q9ULJ6 1067 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 PCDHB7Q9Y5E2 793 aa12.59□□□□□ -0.39
GGA3-217ENST00000583667 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 ARHGEF37A1IGU5 675 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 CTAGE15A4D2H0 777 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 C2orf71A6NGG8 1288 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 TMEM189-UBE2V1I3L0A0 370 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 PODXLO00592 558 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 MICAL2O94851 1124 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 CYP11A1P05108 521 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 CTAGE8P0CG41 777 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 IBSPP21815 317 aaPredicted RBP12.58□□□□□ -0.4
GGA3-217ENST00000583667 MAN1A1P33908 653 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 LHX1P48742 406 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 RPL34P49207 117 aaKnown RBP12.58□□□□□ -0.4
GGA3-217ENST00000583667 SCNN1GP51170 649 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 AFF1P51825 1210 aaKnown RBP12.58□□□□□ -0.4
GGA3-217ENST00000583667 DSC1Q08554 894 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 MAMLD1Q13495 774 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 N4BP2L1Q5TBK1 243 aaPredicted RBP12.58□□□□□ -0.4
GGA3-217ENST00000583667 DENND1BQ6P3S1 775 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 GLB1LQ6UWU2 654 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 CTAGE6Q86UF2 777 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 CTAGE4Q8IX94 777 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 RASGEF1CQ8N431 466 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 ZBTB44Q8NCP5 570 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 MSANTD4Q8NCY6 345 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 ZNF564Q8TBZ8 553 aaPredicted RBP12.58□□□□□ -0.4
GGA3-217ENST00000583667 ACTRT1Q8TDG2 376 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 RSAD2Q8WXG1 361 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 CD101Q93033 1021 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 LPPQ93052 612 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 TNIP3Q96KP6 325 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 CARD9Q9H257 536 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 HMGXB4Q9UGU5 601 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms