RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TRMT2BQ96GJ1 504 aaKnown RBP26.33■■□□□ 1.81
TSEN54-209ENST00000583454 TMEM176AQ96HP8 235 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 CRACR2AQ9BSW2 395 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 MED10Q9BTT4 135 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 SLC46A2Q9BY10 475 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 NAT10Q9H0A0 1025 aaKnown RBP26.33■■□□□ 1.81
TSEN54-209ENST00000583454 C8orf33Q9H7E9 229 aaPredicted RBP26.33■■□□□ 1.81
TSEN54-209ENST00000583454 GTSE1Q9NYZ3 720 aa26.33■■□□□ 1.81
TSEN54-209ENST00000583454 F8VP50 259 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 SPECC1L-ADORA2AF8WAN1 911 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 CCDC130P13994 396 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 PRKCSHP14314 528 aaPredicted RBP26.32■■□□□ 1.8
TSEN54-209ENST00000583454 ACO1P21399 889 aaKnown RBP26.32■■□□□ 1.8
TSEN54-209ENST00000583454 CDC25CP30307 473 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 SATB1Q01826 763 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 ARHGAP29Q52LW3 1261 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 ZNF394Q53GI3 561 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 ARHGAP15Q53QZ3 475 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 ARHGEF19Q8IW93 802 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 PPM1KQ8N3J5 372 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 STKLD1Q8NE28 680 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 KAT5Q92993 513 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 CYFIP2Q96F07 1278 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 SMARCD1Q96GM5 515 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 BPIFA3Q9BQP9 254 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 SMG9Q9H0W8 520 aaKnown RBP26.32■■□□□ 1.8
TSEN54-209ENST00000583454 RBM12Q9NTZ6 932 aaKnown RBP26.32■■□□□ 1.8
TSEN54-209ENST00000583454 FAM49BQ9NUQ9 324 aa26.32■■□□□ 1.8
TSEN54-209ENST00000583454 F11P03951 625 aa26.31■■□□□ 1.8
TSEN54-209ENST00000583454 SLC9A1P19634 815 aa26.31■■□□□ 1.8
TSEN54-209ENST00000583454 ANXA13P27216 316 aa26.31■■□□□ 1.8
TSEN54-209ENST00000583454 EXOC3L4Q17RC7 722 aa26.31■■□□□ 1.8
TSEN54-209ENST00000583454 TRIM65Q6PJ69 517 aa26.31■■□□□ 1.8
TSEN54-209ENST00000583454 RRAGAQ7L523 313 aa26.31■■□□□ 1.8
TSEN54-209ENST00000583454 HEXIM2Q96MH2 286 aaKnown RBP26.31■■□□□ 1.8
TSEN54-209ENST00000583454 AP1G2O75843 785 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 CCR3P51677 355 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 KPNA1P52294 538 aaPredicted RBP26.3■■□□□ 1.8
TSEN54-209ENST00000583454 TNK2Q07912 1038 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 C1orf228Q6PIY5 440 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 Q6ZS52 159 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 DENND5BQ6ZUT9 1274 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 RALGPS2Q86X27 583 aaPredicted RBP26.3■■□□□ 1.8
TSEN54-209ENST00000583454 TTC8Q8TAM2 541 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 BPIFB1Q8TDL5 484 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 JAKMIP2Q96AA8 810 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 KREMEN1Q96MU8 473 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 KCNK16Q96T55 309 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 SMOQ99835 787 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 TTLL2Q9BWV7 592 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 HSD3B7Q9H2F3 369 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 CSNK1G1Q9HCP0 422 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 DMAP1Q9NPF5 467 aaPredicted RBP26.3■■□□□ 1.8
TSEN54-209ENST00000583454 DLL3Q9NYJ7 618 aa26.3■■□□□ 1.8
TSEN54-209ENST00000583454 UXTQ9UBK9 157 aaPredicted RBP26.3■■□□□ 1.8
TSEN54-209ENST00000583454 SYCE3A1L190 88 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 DPYSL4O14531 572 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 ZNF18P17022 549 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 TGM1P22735 817 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 PON1P27169 355 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 KRT31Q15323 416 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 CMTM8Q8IZV2 173 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 SPEM1Q8N4L4 309 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 ZMIZ2Q8NF64 920 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 RIN3Q8TB24 985 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 KRT82Q9NSB4 513 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 C2orf42Q9NWW7 574 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 NCDNQ9UBB6 729 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 MAGED2Q9UNF1 606 aaPredicted RBP26.29■■□□□ 1.8
TSEN54-209ENST00000583454 CCL26Q9Y258 94 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 SPTBN2O15020 2390 aa26.29■■□□□ 1.8
TSEN54-209ENST00000583454 HELZP42694 1942 aaKnown RBP26.28■■□□□ 1.8
TSEN54-209ENST00000583454 TADA3O75528 432 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 PAPSS2O95340 614 aaPredicted RBP26.28■■□□□ 1.8
TSEN54-209ENST00000583454 USP46P62068 366 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 CCINQ13939 588 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 PPP1R26Q5T8A7 1209 aaPredicted RBP26.28■■□□□ 1.8
TSEN54-209ENST00000583454 ARHGAP17Q68EM7 881 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 ENOSF1Q7L5Y1 443 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 CHFRQ96EP1 664 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 GCNAQ96QF7 691 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 UBE2TQ9NPD8 197 aaPredicted RBP26.28■■□□□ 1.8
TSEN54-209ENST00000583454 EHD2Q9NZN4 543 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 KIAA1257Q9ULG3 409 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 CNTN6Q9UQ52 1028 aa26.28■■□□□ 1.8
TSEN54-209ENST00000583454 ATG2BQ96BY7 2078 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 LRRC10BA6NIK2 292 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 SOBPA7XYQ1 873 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 K7ESF4 209 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 TNFRSF10BO14763 440 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 BEST1O76090 585 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 FAM200BP0CF97 657 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 ADORA2BP29275 332 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 CXCL12P48061 93 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 PLCB2Q00722 1185 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 DMWDQ09019 674 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 LRRC32Q14392 662 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 DPY19L2P1Q6NXN4 242 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 TMEM270Q6UE05 265 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 NUP93Q8N1F7 819 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms