RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ATG16L2Q8NAA4 619 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 SUPT20HQ8NEM7 779 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 NEU4Q8WWR8 484 aaPredicted RBP6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 LARP4BQ92615 738 aaKnown RBP6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 FAM227BQ96M60 508 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 EHD3Q9NZN3 535 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 COL4A3Q01955 1670 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 MAST3O60307 1309 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 PLEKHD1A6NEE1 506 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 GOLGA6L3A6NEY3 463 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 LGALS16A8MUM7 142 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 CCNT2O60583 730 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 SNX2O60749 519 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 SKAP2O75563 359 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 EIF3JO75822 258 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 EGR1P18146 543 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 MCM7P33993 719 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 PDE1AP54750 535 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 BLOC1S1P78537 153 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 GPS1Q13098 491 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 KRT72Q14CN4 511 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 PFKFB4Q16877 469 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 MRNIPQ6NTE8 343 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 DPY19L3Q6ZPD9 716 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 BEND2Q8NDZ0 799 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 NECTIN3Q9NQS3 549 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 SYBUQ9NX95 663 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 TMOD4Q9NZQ9 345 aa6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 CCNL1Q9UK58 526 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 DRG1Q9Y295 367 aaKnown RBP6.58□□□□□ -1.36
SMARCE1-219ENST00000583294 SALL3Q9BXA9 1300 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 WDR27A2RRH5 827 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 MPPED1O15442 326 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 CSTBP04080 98 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 IL6RP08887 468 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 SRGAP2BP0DMP2 458 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 ARP10275 920 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 ZFXP17010 805 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 MST1P26927 711 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 PLA2G5P39877 138 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 MPLP40238 635 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 AVPR1BP47901 424 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 MRPS35P82673 323 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 ABHD18Q0P651 414 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 GALNT1Q10472 559 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 FOXI1Q12951 378 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 KLF10Q13118 480 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 MPP3Q13368 585 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 BLMHQ13867 455 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 BMPR2Q13873 1038 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 SPARCL1Q14515 664 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 DHX8Q14562 1220 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 ZACNQ401N2 412 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 ZNF618Q5T7W0 954 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 TEDDM1Q5T9Z0 273 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 USP51Q70EK9 711 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 ZNF384Q8TF68 577 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 STYXQ8WUJ0 223 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 LINC00476Q8WZB0 136 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 RFKQ969G6 155 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 ZNF668Q96K58 619 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 PBKQ96KB5 322 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 HAPLN3Q96S86 360 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 ALG8Q9BVK2 526 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 INO80BQ9C086 356 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 PCED1AQ9H1Q7 454 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 LRFN1Q9P244 771 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 LRIT1Q9P2V4 623 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 VPS51Q9UID3 782 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 SLC27A6Q9Y2P4 619 aa6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 EPN1Q9Y6I3 576 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1-219ENST00000583294 LOC102724159A0A0B4J2E5 919 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 GRID2IPA4D2P6 1211 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 NPC1O15118 1278 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 TNFRSF6BO95407 300 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 ESRRBO95718 433 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 HALP42357 657 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 SEC24CP53992 1094 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 TIRAPP58753 221 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 TIAL1Q01085 375 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 PWP2Q15269 919 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 PDCD2Q16342 344 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 SLC5A9Q2M3M2 681 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 ABLIM2Q6H8Q1 611 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 FSTL5Q8N475 847 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 LRRC71Q8N4P6 559 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 MYCT1Q8N699 235 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 METTL25Q8N6Q8 603 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 ACTRT2Q8TDY3 377 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 SOCS4Q8WXH5 440 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 GRAMD1AQ96CP6 724 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 COQ10AQ96MF6 247 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 PRPF18Q99633 342 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 DPCDQ9BVM2 203 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 VN1R3Q9BXE9 311 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 CHMP4AQ9BY43 222 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 EPS8L2Q9H6S3 715 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 ING1Q9UK53 422 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 RIMKLBQ9ULI2 386 aa6.56□□□□□ -1.36
SMARCE1-219ENST00000583294 SCAF8Q9UPN6 1271 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms