RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 MRPS31Q92665 395 aaKnown RBP10.31□□□□□ -0.76
TOP3A-211ENST00000581536 TAF4BQ92750 862 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 DNASE1L2Q92874 299 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 CLDN23Q96B33 292 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 CCDC34Q96HJ3 373 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 C8orf48Q96LL4 319 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 SMOQ99835 787 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 FAM83CQ9BQN1 747 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 BCO2Q9BYV7 579 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 LINC00597Q9H2U6 94 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 LMAN1LQ9HAT1 526 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 TMEM8AQ9HCN3 771 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 TRPV5Q9NQA5 729 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 CHMP5Q9NZZ3 219 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 GCNT4Q9P109 453 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 MYO16Q9Y6X6 1858 aa10.31□□□□□ -0.76
TOP3A-211ENST00000581536 CACNA1HO95180 2353 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 TNFRSF10BO14763 440 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 KINO60870 393 aaKnown RBP10.3□□□□□ -0.76
TOP3A-211ENST00000581536 EPB41P11171 864 aaKnown RBP10.3□□□□□ -0.76
TOP3A-211ENST00000581536 CHRNB1P11230 501 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 ARSAP15289 507 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 HDCP19113 662 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 ANXA13P27216 316 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 KPNA1P52294 538 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-211ENST00000581536 STX17P56962 302 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 PRR20EP86478 221 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 PRR20CP86479 221 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 PRR20DP86480 221 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 PRR20BP86481 221 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 PRR20AP86496 221 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 FKBP3Q00688 224 aaKnown RBP10.3□□□□□ -0.76
TOP3A-211ENST00000581536 MORC3Q14149 939 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 ARHGAP29Q52LW3 1261 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 ZNF394Q53GI3 561 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 TCERG1LQ5VWI1 586 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 KRT39Q6A163 491 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 TSSK4Q6SA08 328 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 FRMD5Q7Z6J6 570 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 NUP93Q8N1F7 819 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 SLC2A14Q8TDB8 520 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 BAP1Q92560 729 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 CHFRQ96EP1 664 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 NELL2Q99435 816 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 ELOVL4Q9GZR5 314 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 EBF3Q9H4W6 596 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 FBRSL1Q9HCM7 1045 aaKnown RBP10.3□□□□□ -0.76
TOP3A-211ENST00000581536 HPS4Q9NQG7 708 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 RBM12Q9NTZ6 932 aaKnown RBP10.3□□□□□ -0.76
TOP3A-211ENST00000581536 FAM49BQ9NUQ9 324 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 SPATA6Q9NWH7 488 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-211ENST00000581536 RAB20Q9NX57 234 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 OBP2AQ9NY56 170 aa10.3□□□□□ -0.76
TOP3A-211ENST00000581536 UXTQ9UBK9 157 aaPredicted RBP10.3□□□□□ -0.76
TOP3A-211ENST00000581536 ZFHX2Q9C0A1 2572 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 ZNF840PA6NDX5 716 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 SPECC1L-ADORA2AF8WAN1 911 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 MAN2B1O00754 1011 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 SCAMP3O14828 347 aaKnown RBP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 GDF9O60383 454 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 USP17L7P0C7H9 530 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 SP9P0CG40 484 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 P4HA1P13674 534 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 DDX6P26196 483 aaKnown RBP eCLIP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 ADORA2BP29275 332 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 MAP3K7CLP57077 242 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 NOP14P78316 857 aaKnown RBP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 ENPEPQ07075 957 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 MTAPQ13126 283 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 RUNX3Q13761 415 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 GAS6Q14393 721 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 PON2Q15165 354 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 DCAF17Q5H9S7 520 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 NAIF1Q69YI7 327 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 ASCL5Q7RTU5 278 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 FAM35AQ86V20 835 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 NELFBQ8WX92 580 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 CYFIP2Q96F07 1278 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 DHTKD1Q96HY7 919 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 TNIP3Q96KP6 325 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 TSG101Q99816 390 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 ARID3AQ99856 593 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 TTLL2Q9BWV7 592 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 OSBPL6Q9BZF3 934 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 IRX2Q9BZI1 471 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 C2orf42Q9NWW7 574 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 TRPM5Q9NZQ8 1165 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 HOOK1Q9UJC3 728 aaKnown RBP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 R4GN57 208 aa10.29□□□□□ -0.76
TOP3A-211ENST00000581536 MYO18AQ92614 2054 aaKnown RBP10.29□□□□□ -0.76
TOP3A-211ENST00000581536 TRAV19A0A0A6YYK7 116 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 ANTXRLA6NF34 631 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 SOBPA7XYQ1 873 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 CKMP06732 381 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 YWHAQP27348 245 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 GTF2H1P32780 548 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 NBL1P41271 181 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 MXI1P50539 228 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 GALK1P51570 392 aa10.28□□□□□ -0.76
TOP3A-211ENST00000581536 SH3BP2P78314 561 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms