RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SLC1A1P43005 524 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ZNF252P-AS1Q0IIN9 211 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PIGHQ14442 188 aaPredicted RBP14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RPS6KA1Q15418 735 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 EFHC1Q5JVL4 640 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SDHAF4Q5VUM1 108 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SLC26A9Q7LBE3 791 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TMC7Q7Z402 723 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ZNF461Q8TAF7 563 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FNIP1Q8TF40 1166 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 KHSRPQ92945 711 aaKnown RBP eCLIP14.52□□□□□ -0.087e-8■■□□□ 13.1
CDK5RAP3-219ENST00000580670 FAM149B1Q96BN6 582 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CRISPLD1Q9H336 500 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 AFF4Q9UHB7 1163 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 LZTS1Q9Y250 596 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 LAMA2P24043 3122 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PATJQ8NI35 1801 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 C2CD4BA6NLJ0 364 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 C5orf67F2Z3F1 127 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SART1O43290 800 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 LILRB3O75022 631 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SOAT2O75908 522 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ABLIM3O94929 683 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CXCL14O95715 111 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ZBED1O96006 694 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PDGFRAP16234 1089 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GPD1P21695 349 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MAN1A1P33908 653 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 FLT3P36888 993 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SLC5A3P53794 718 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DAOAP59103 153 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RAB33AQ14088 237 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TPGS2Q68CL5 300 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SCAMP5Q8TAC9 235 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RXFP2Q8WXD0 754 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 FNIP2Q9P278 1114 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SNX12Q9UMY4 172 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 USTQ9Y2C2 406 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SAR1BQ9Y6B6 198 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GBF1Q92538 1859 aa14.52□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TNFRSF10BO14763 440 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TEX28O15482 410 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 HSF2BPO75031 334 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CSPG5O95196 566 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RB1P06400 928 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ZNF143P52747 638 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 AMPD2Q01433 879 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 IFRD2Q12894 506 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 NAA30Q147X3 362 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DAB2IPQ5VWQ8 1189 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TRNP1Q6NT89 227 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 NUP93Q8N1F7 819 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 NIPA2Q8N8Q9 360 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SPPL3Q8TCT6 385 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 POF1BQ8WVV4 589 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 HES6Q96HZ4 224 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TGS1Q96RS0 853 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PSMB7Q99436 277 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TCF25Q9BQ70 676 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 C11orf84Q9BUA3 381 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 L2HGDHQ9H9P8 463 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RXFP1Q9HBX9 757 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ENTPD7Q9NQZ7 604 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 YBX2Q9Y2T7 364 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 USP3Q9Y6I4 520 aa14.51□□□□□ -0.09
CDK5RAP3-219ENST00000580670 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 YJEFN3A6XGL0 299 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 MIF4GDA9UHW6 222 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 E7ENQ6 273 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SRGAP2O75044 1071 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SLU7O95391 586 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GLI1P08151 1106 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ATF2P15336 505 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SDC4P31431 198 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PBX2P40425 430 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SSR1P43307 286 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TUFMP49411 452 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ERVFC1P60507 584 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 RPL10AP62906 217 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 YWHAZP63104 245 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 UBE3AQ05086 875 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 PM20D1Q6GTS8 502 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 HFE2Q6ZVN8 426 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ARCQ7LC44 396 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 KRT222Q8N1A0 295 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SCML4Q8N228 414 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 STKLD1Q8NE28 680 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 GPR152Q8TDT2 470 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 IRGQQ8WZA9 623 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CD101Q93033 1021 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 SAMD11Q96NU1 681 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 OSBPL9Q96SU4 736 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 CNPY3Q9BT09 278 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 TLR9Q9NR96 1032 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 ASNSD1Q9NWL6 643 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DPYSL4O14531 572 aa14.5□□□□□ -0.09
CDK5RAP3-219ENST00000580670 DAB1O75553 588 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms