RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 KBTBD3Q8NAB2 608 aa7.35□□□□□ -1.23
PPP4R1-216ENST00000580283 LOXL4Q96JB6 756 aa7.35□□□□□ -1.23
PPP4R1-216ENST00000580283 APOL5Q9BWW9 433 aa7.35□□□□□ -1.23
PPP4R1-216ENST00000580283 TLE6Q9H808 572 aa7.35□□□□□ -1.23
PPP4R1-216ENST00000580283 ZNF287Q9HBT7 754 aa7.35□□□□□ -1.23
PPP4R1-216ENST00000580283 RALYQ9UKM9 306 aaKnown RBP7.35□□□□□ -1.23
PPP4R1-216ENST00000580283 GPR179Q6PRD1 2367 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 WDR19Q8NEZ3 1342 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 TSPY2A6NKD2 308 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 C2CD4DB7Z1M9 353 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 EIF3JO75822 258 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 ZNF888P0CJ79 500 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 SNHG28P0DPA3 235 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 GHRP10912 638 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 PDHBP11177 359 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 ETV4P43268 484 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 CLCN5P51795 746 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 RRADP55042 308 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 CD83Q01151 205 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 ZNF543Q08ER8 600 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 STILQ15468 1287 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 DUSP6Q16828 381 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 LRRTM3Q86VH5 581 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 KIAA1958Q8N8K9 716 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 NSUN6Q8TEA1 469 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 APBB2Q92870 758 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 SPATA33Q96N06 139 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 IWS1Q96ST2 819 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 RMDN3Q96TC7 470 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 MPHOSPH6Q99547 160 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 UBA5Q9GZZ9 404 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 AGO3Q9H9G7 860 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 PXMP2Q9NR77 195 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 SORCS3Q9UPU3 1222 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 PLAAQ9Y263 795 aa7.34□□□□□ -1.23
PPP4R1-216ENST00000580283 WDFY3Q8IZQ1 3526 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 B4DLN1 442 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 GAS7O60861 476 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 CAND2O75155 1236 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 GGPS1O95749 300 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 CYP17A1P05093 508 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 LGALS2P05162 132 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 GOLGA8HP0CJ92 632 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 GNAT2P19087 354 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 MRPL12P52815 198 aaKnown RBP7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 PUM1Q14671 1186 aaKnown RBP eCLIP7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 ANGPT1Q15389 498 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 ZMAT1Q5H9K5 638 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 TSHZ3Q63HK5 1081 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 ANKRD54Q6NXT1 300 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 LIMS2Q7Z4I7 341 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 UBALD2Q8IYN6 164 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 CMTR2Q8IYT2 770 aaKnown RBP7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 IL31RAQ8NI17 732 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 SCYL1Q96KG9 808 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 RBM15Q96T37 977 aaKnown RBP eCLIP7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 ZDHHC5Q9C0B5 715 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 POMKQ9H5K3 350 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 PPP4R1LQ9P1A2 415 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 ANAPC4Q9UJX5 808 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 LAMA1P25391 3075 aa7.33□□□□□ -1.24
PPP4R1-216ENST00000580283 DOCK8Q8NF50 2099 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 DOCK6Q96HP0 2047 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 ANKRD11Q6UB99 2663 aaPredicted RBP7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 SETXQ7Z333 2677 aaKnown RBP7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 A0A0G2JNJ9 132 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 ORC4O43929 436 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 RANBP6O60518 1105 aaKnown RBP7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 RAB11FIP3O75154 756 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 LMNAP02545 664 aaKnown RBP7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 TOP1P11387 765 aaKnown RBP7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 AOC1P19801 751 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 UBA1P22314 1058 aaKnown RBP7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 APEX1P27695 318 aaKnown RBP7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 TECP42680 631 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 ALDH6A1Q02252 535 aaKnown RBP7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 FBXO47Q5MNV8 452 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 MARCH8Q5T0T0 291 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 KANK2Q63ZY3 851 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 GRAMD4Q6IC98 578 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 CIR1Q86X95 450 aaPredicted RBP7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 CCDC105Q8IYK2 499 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 ZBTB10Q96DT7 871 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 NEK1Q96PY6 1258 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 FOXB1Q99853 325 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 MAF1Q9H063 256 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 SMPD4Q9NXE4 827 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 Q9UFV3 132 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 CDC42EP3Q9UKI2 254 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 R4GN57 208 aa7.32□□□□□ -1.24
PPP4R1-216ENST00000580283 UBA6A0AVT1 1052 aaPredicted RBP7.31□□□□□ -1.24
PPP4R1-216ENST00000580283 HIDE1A8MVS5 230 aa7.31□□□□□ -1.24
PPP4R1-216ENST00000580283 DVL2O14641 736 aa7.31□□□□□ -1.24
PPP4R1-216ENST00000580283 WEE2P0C1S8 567 aa7.31□□□□□ -1.24
PPP4R1-216ENST00000580283 MYCLP12524 364 aaPredicted RBP7.31□□□□□ -1.24
PPP4R1-216ENST00000580283 CD52P31358 61 aa7.31□□□□□ -1.24
PPP4R1-216ENST00000580283 MEOX1P50221 254 aa7.31□□□□□ -1.24
PPP4R1-216ENST00000580283 GHRHRQ02643 423 aa7.31□□□□□ -1.24
PPP4R1-216ENST00000580283 ROM1Q03395 351 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms