RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TMEM132DQ14C87 1099 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 SURF1Q15526 300 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 CYP4V2Q6ZWL3 525 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 LRRC6Q86X45 466 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 CTAGE3PQ8IX95 158 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 KCNV2Q8TDN2 545 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 CLEC4CQ8WTT0 213 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 UTP4Q969X6 686 aaKnown RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 KIF12Q96FN5 646 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 SERAC1Q96JX3 654 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 FAM49AQ9H0Q0 323 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-209ENST00000580095 SNX9Q9Y5X1 595 aa10.95□□□□□ -0.66
TOP3A-209ENST00000580095 A0A0G2JND7 137 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 TCRBV9S1A1TA0A576 114 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 APOC4-APOC2K7ER74 178 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 HBP1O60381 514 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 UGT1A9O60656 530 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 APOC2P02655 101 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 LGALS2P05162 132 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 ELF1P32519 619 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 ADCYAP1R1P41586 468 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 ROR1Q01973 937 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 FAAP100Q0VG06 881 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 KRT81Q14533 505 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PDK4Q16654 411 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 GOLGA7BQ2TAP0 167 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 EFHC2Q5JST6 749 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PPP1R2P3Q6NXS1 205 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 CMASQ8NFW8 434 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 RFWD2Q8NHY2 731 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 CCDC110Q8TBZ0 833 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 KCNN1Q92952 543 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 FAF2Q96CS3 445 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 OPTNQ96CV9 577 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 LRRC37BQ96QE4 947 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 MRPL45Q9BRJ2 306 aaKnown RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 UGT1A7Q9HAW7 530 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 UGT1A10Q9HAW8 530 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 UGT1A8Q9HAW9 530 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 DPP3Q9NY33 737 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 ERAP1Q9NZ08 941 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 ACTL7BQ9Y614 415 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 EME2A4GXA9 379 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PRPSAP2O60256 369 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 EDF1O60869 148 aaKnown RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 APRTP07741 180 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PFKMP08237 780 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PDGFRBP09619 1106 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 NEFHP12036 1026 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 RBL1P28749 1068 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PTPN7P35236 360 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PHKA2P46019 1235 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PREPLQ4J6C6 727 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 ARMCX2Q7L311 632 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 DCAKDQ8WVC6 231 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 NDRG1Q92597 394 aaKnown RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 TTC17Q96AE7 1141 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 C18orf25Q96B23 403 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 MCRS1Q96EZ8 462 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PRR11Q96HE9 360 aaPredicted RBP10.94□□□□□ -0.66
TOP3A-209ENST00000580095 FAM111AQ96PZ2 611 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 FOXP3Q9BZS1 431 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 MFHAS1Q9Y4C4 1052 aa10.94□□□□□ -0.66
TOP3A-209ENST00000580095 PRPF4O43172 522 aaKnown RBP eCLIP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 PYGBP11216 843 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 GPD1P21695 349 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 CCNHP51946 323 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 MOGSQ13724 837 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 BMPR2Q13873 1038 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 ZNF268Q14587 947 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 TTLL4Q14679 1199 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 MTDHQ86UE4 582 aaKnown RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 TDRPQ86YL5 185 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 RIBC1Q8N443 379 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 DPEP3Q9H4B8 488 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 ACSS3Q9H6R3 686 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 NME7Q9Y5B8 376 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 DNAJC25-GNG10A0A024R161 153 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 C2CD4BA6NLJ0 364 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 CXorf49A8MYA2 514 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 GABBR2O75899 941 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 UNC5CO95185 931 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 TOP3BO95985 862 aaKnown RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 GBP2P32456 591 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 GRIA1P42261 906 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 IREB2P48200 963 aaKnown RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 ZNF143P52747 638 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 ARHGAP1Q07960 439 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 GRIK3Q13003 919 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 PTK7Q13308 1070 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 CCDC14Q49A88 953 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 TAF1BQ53T94 588 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 SESTD1Q86VW0 696 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 TTC30AQ86WT1 665 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 PPM1NQ8N819 430 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 ZNF483Q8TF39 744 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms