RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, human

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC57-211	ENST00000578187	DCLK2	Q8N568	766 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	STKLD1	Q8NE28	680 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	ENOX1	Q8TC92	643 aa	Known RBP	13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	SMARCD1	Q96GM5	515 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	C8orf48	Q96LL4	319 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	MYRFL	Q96LU7	910 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	NT5C1B	Q96P26	610 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	NT5C1A	Q9BXI3	368 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	SMG9	Q9H0W8	520 aa	Known RBP	13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	TRPC7	Q9HCX4	862 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	CISH	Q9NSE2	258 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	TMEM30A	Q9NV96	361 aa		13.54	□□□□□ -0.24
CCDC57-211	ENST00000578187	TRAV19	A0A0A6YYK7	116 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187		F8VP50	259 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	ATG13	O75143	517 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	F11	P03951	625 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	CKM	P06732	381 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	USP17L7	P0C7H9	530 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	CCDC130	P13994	396 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	TRIM21	P19474	475 aa	Known RBP	13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	PTMS	P20962	102 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	GRIK1	P39086	918 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	SATB1	Q01826	763 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	LMNB2	Q03252	620 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	TNK2	Q07912	1038 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	RUNX3	Q13761	415 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	ZNF268	Q14587	947 aa	Predicted RBP	13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	PDGFRL	Q15198	375 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	MAN2A1	Q16706	1144 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	TXNDC8	Q6A555	127 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	LAIR1	Q6GTX8	287 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	CAVIN1	Q6NZI2	390 aa	Known RBP	13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	PRR23B	Q6ZRT6	265 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	TMEM150A	Q86TG1	271 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	USP13	Q92995	863 aa	Predicted RBP	13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	GKN1	Q9NS71	199 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	USP18	Q9UMW8	372 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	NFE2L3	Q9Y4A8	694 aa		13.53	□□□□□ -0.24
CCDC57-211	ENST00000578187	GTPBP10	A4D1E9	387 aa	Known RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	PRR5-ARHGAP8	B1AHC4	643 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	TADA3	O75528	432 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	PAPSS2	O95340	614 aa	Predicted RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	MTIF2	P46199	727 aa	Known RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	RAD23B	P54727	409 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	YWHAE	P62258	255 aa	Known RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	ARHGAP8	P85298	464 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	GCNT1	Q02742	428 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	LRMP	Q12912	555 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	SIM2	Q14190	667 aa	Predicted RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	CDKAL1	Q5VV42	579 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	DENND5B	Q6ZUT9	1274 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	LONP2	Q86WA8	852 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	CPA6	Q8N4T0	437 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	C12orf29	Q8N999	325 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	EHBP1	Q8NDI1	1231 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	TTC16	Q8NEE8	873 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	SLC2A14	Q8TDB8	520 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	RMDN1	Q96DB5	314 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	LRRC3B	Q96PB8	259 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	HNRNPAB	Q99729	332 aa	Known RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	MED10	Q9BTT4	135 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	TTLL2	Q9BWV7	592 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	DNAI2	Q9GZS0	605 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	INTS2	Q9H0H0	1204 aa	Known RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	EBF3	Q9H4W6	596 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	CSNK1G1	Q9HCP0	422 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	KRT82	Q9NSB4	513 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	SAMSN1	Q9NSI8	373 aa	Known RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	RBM12	Q9NTZ6	932 aa	Known RBP	13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	FAM49B	Q9NUQ9	324 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	GCNT4	Q9P109	453 aa		13.52	□□□□□ -0.25
CCDC57-211	ENST00000578187	CACNA1I	Q9P0X4	2223 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	KCNJ18	B7U540	433 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	RIOK3	O14730	519 aa	Known RBP	13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	AP1G2	O75843	785 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	TDGF1	P13385	188 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	ACO1	P21399	889 aa	Known RBP	13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	EEF1G	P26641	437 aa	Known RBP	13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	IFNAR2	P48551	515 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	TYRO3	Q06418	890 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	NR1H3	Q13133	447 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	CCIN	Q13939	588 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	KCNJ12	Q14500	433 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	MTF1	Q14872	753 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	ZNF394	Q53GI3	561 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	MIIP	Q5JXC2	388 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	TRIM65	Q6PJ69	517 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	TXNDC11	Q6PKC3	985 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	CREBRF	Q8IUR6	639 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	ARHGEF19	Q8IW93	802 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	PPM1K	Q8N3J5	372 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	SLC4A11	Q8NBS3	891 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	ZMIZ2	Q8NF64	920 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	ATP2A3	Q93084	1043 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	CYFIP2	Q96F07	1278 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	TMEM176A	Q96HP8	235 aa		13.51	□□□□□ -0.25
CCDC57-211	ENST00000578187	FAM83C	Q9BQN1	747 aa		13.51	□□□□□ -0.25

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