RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 SCAMP3O14828 347 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 ZBTB24O43167 697 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 ADAM23O75077 832 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 ITPKAP23677 461 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 RPL6Q02878 288 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 GAD2Q05329 585 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 TAF10Q12962 218 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 ACAP1Q15027 740 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 DUOXA1Q1HG43 343 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 MDH1BQ5I0G3 518 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 ERICH6BQ5W0A0 696 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 SLC36A4Q6YBV0 504 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 CCDC73Q6ZRK6 1079 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 PIP4P1Q86T03 277 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 WDR49Q8IV35 697 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 SFTPA1Q8IWL2 248 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 FRMD1Q8N878 549 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 PDZD8Q8NEN9 1154 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 OR5B17Q8NGF7 314 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 GTPBP2Q9BX10 602 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 KIAA1586Q9HCI6 787 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 SLC6A14Q9UN76 642 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 ANKRD11Q6UB99 2663 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 NBEAQ8NFP9 2946 aa12.4□□□□□ -0.42
CTDNEP1-212ENST00000576613 ITPR1Q14643 2758 aa12.4□□□□□ -0.43
CTDNEP1-212ENST00000576613 PTPRJQ12913 1337 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 SPAARA0A1B0GVQ0 90 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 FRMD3A2A2Y4 597 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 TBC1D3BA6NDS4 549 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 OPHN1O60890 802 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 PRPF6O94906 941 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 RTN3O95197 1032 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 SERPINF2P08697 491 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 GNL1P36915 607 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 STAT6P42226 847 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 PI4KAP42356 2102 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 TNNC1P63316 161 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 MESP2Q0VG99 397 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 IFRD2Q12894 506 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 HNRNPDQ14103 355 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 LY6G5CQ5SRR4 150 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 EMC10Q5UCC4 262 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 C12orf40Q86WS4 652 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 ZNF513Q8N8E2 541 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 OVCA2Q8WZ82 227 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 ZDHHC4Q9NPG8 344 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 PANK4Q9NVE7 773 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 DEC1Q9P2X7 70 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 KLK13Q9UKR3 277 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 LHX6Q9UPM6 363 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 SH3BP1Q9Y3L3 701 aa12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 SRPRBQ9Y5M8 271 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-212ENST00000576613 HOXC11O43248 304 aaPredicted RBP12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 TACC1O75410 805 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 FAM163BP0C2L3 166 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 HOXB2P14652 356 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 PTPN1P18031 435 aaKnown RBP12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 YWHAQP27348 245 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 RING1Q06587 406 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 ZNF423Q2M1K9 1284 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 LRSAM1Q6UWE0 723 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 CBWD2Q8IUF1 395 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 CCDC65Q8IXS2 484 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 NUP93Q8N1F7 819 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 PHTF2Q8N3S3 785 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 OR6B3Q8NGW1 331 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 MRPL45Q9BRJ2 306 aaKnown RBP12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 CAPN10Q9HC96 672 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 FBXO2Q9UK22 296 aaPredicted RBP12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 CLIC4Q9Y696 253 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 ADAMTS9Q9P2N4 1935 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 MYOFQ9NZM1 2061 aa12.38□□□□□ -0.43
CTDNEP1-212ENST00000576613 ATP8B3O60423 1300 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 VPS37CA5D8V6 355 aaPredicted RBP12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 ZNF217O75362 1048 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 TULP3O75386 442 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 SYPP08247 313 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 GABRG2P18507 467 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 TNNI1P19237 187 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 NTSR1P30989 418 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 TUBP50607 506 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 CACNA2D1P54289 1103 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 ZNF33AQ06730 810 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 ANO4Q32M45 955 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 C10orf76Q5T2E6 689 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 HECTD3Q5T447 861 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 SDE2Q6IQ49 451 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 TRAPPC11Q7Z392 1133 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 ETFBKMTQ8IXQ9 262 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 MINDY1Q8N5J2 469 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 NAT16Q8N8M0 369 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 TERB1Q8NA31 727 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 B3GALNT2Q8NCR0 500 aa12.37□□□□□ -0.43
CTDNEP1-212ENST00000576613 FBXO32Q969P5 355 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms