RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 ZMIZ2Q8NF64 920 aa9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 MDGA1Q8NFP4 955 aa9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 NUDT16L1Q9BRJ7 211 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 FSCN3Q9NQT6 498 aa9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 NSMCE4AQ9NXX6 385 aa9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 ORC3Q9UBD5 711 aaPredicted RBP9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 CNOT6Q9ULM6 557 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 NDRG4Q9ULP0 352 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 DNAJC16Q9Y2G8 782 aa9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 MRPS17Q9Y2R5 130 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-226ENST00000575461 A0A1B0GTL3 188 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 FSD2A1L4K1 749 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 SAC3D1A6NKF1 404 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 SYT13Q7L8C5 426 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 PLEKHH3Q7Z736 793 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 RHOT2Q8IXI1 618 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 SP8Q8IXZ3 490 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 SLC15A3Q8IY34 581 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 OR8H2Q8N162 312 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 NSUN7Q8NE18 718 aaKnown RBP9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 RSRC1Q96IZ7 334 aaKnown RBP9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 LRIG1Q96JA1 1093 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 TIGD1Q96MW7 591 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 MPHOSPH9Q99550 1183 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 GBA2Q9HCG7 927 aaPredicted RBP9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 CTTNBP2NLQ9P2B4 639 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 KCTD3Q9Y597 815 aa9.18□□□□□ -0.94
CALCOCO2-226ENST00000575461 SPATA31A3Q5VYP0 1347 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 USO1O60763 962 aaKnown RBP9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 TMCC2O75069 709 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 RPP40O75818 363 aaKnown RBP9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 MED14OSP0DP75 135 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 KCNA2P16389 499 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 CHMP24386 653 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 RBL1P28749 1068 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 MAN2A2P49641 1150 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 SETQ01105 290 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 BAK1Q16611 211 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 GALNTL6Q49A17 601 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 DCAF17Q5H9S7 520 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 ARTNQ5T4W7 220 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 DGAT2L7PQ6IED9 249 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 ANKRD52Q8NB46 1076 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 HMGB4Q8WW32 186 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 WDR24Q96S15 920 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 SMOC2Q9H3U7 446 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 LIN7CQ9NUP9 197 aaKnown RBP9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 KCND3Q9UK17 655 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 CYP46A1Q9Y6A2 500 aa9.17□□□□□ -0.94
CALCOCO2-226ENST00000575461 COL15A1P39059 1388 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 TDRD9Q8NDG6 1382 aaKnown RBP9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 HGFP14210 728 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 EPHA3P29320 983 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 PSMC2P35998 433 aaKnown RBP9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 GATMP50440 423 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 GRM7Q14831 915 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 NFIXQ14938 502 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 ELAVL1Q15717 326 aaKnown RBP9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 TBRG1Q3YBR2 411 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 ZNF385BQ569K4 471 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 ARHGAP40Q5TG30 622 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 TSHZ3Q63HK5 1081 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 HAUS3Q68CZ6 603 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 ANO7Q6IWH7 933 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 RASGRP2Q7LDG7 609 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 LMF1Q96S06 567 aa9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 VSX1Q9NZR4 365 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO2-226ENST00000575461 SCO2A0A1W2PP80 73 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 VWA3AA6NCI4 1184 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 BTBD11A6QL63 1104 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 TOR1BO14657 336 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 UQCRC1P31930 480 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 ANXA11P50995 505 aaKnown RBP9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 TIAL1Q01085 375 aaKnown RBP eCLIP9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 SF3A3Q12874 501 aaKnown RBP eCLIP9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 CLCA4Q14CN2 919 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 RGS7BPQ6MZT1 257 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 TMPRSS9Q7Z410 1059 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 ARMC8Q8IUR7 673 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 ELOA2Q8IYF1 753 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 SUN3Q8TAQ9 357 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 ZNF483Q8TF39 744 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 DACT3Q96B18 629 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 RNF125Q96EQ8 232 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 TMEM176AQ96HP8 235 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 GPR20Q99678 358 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 PLA2G12BQ9BX93 195 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 HSFX1Q9UBD0 423 aa9.15□□□□□ -0.94
CALCOCO2-226ENST00000575461 FAM90A20PA6NIJ5 464 aa9.14□□□□□ -0.95
CALCOCO2-226ENST00000575461 STX16-NPEPL1H3BU86 382 aa9.14□□□□□ -0.95
CALCOCO2-226ENST00000575461 STX16O14662 325 aa9.14□□□□□ -0.95
CALCOCO2-226ENST00000575461 SEPT4O43236 478 aa9.14□□□□□ -0.95
CALCOCO2-226ENST00000575461 B4GALT3O60512 393 aa9.14□□□□□ -0.95
CALCOCO2-226ENST00000575461 SUN1O94901 812 aa9.14□□□□□ -0.95
CALCOCO2-226ENST00000575461 CER1O95813 267 aa9.14□□□□□ -0.95
CALCOCO2-226ENST00000575461 MYCLP12524 364 aaPredicted RBP9.14□□□□□ -0.95
CALCOCO2-226ENST00000575461 RAD52P43351 418 aa9.14□□□□□ -0.95
CALCOCO2-226ENST00000575461 PDE6CP51160 858 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms