RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 FAM83CQ9BQN1 747 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 TTLL2Q9BWV7 592 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 NIF3L1Q9GZT8 377 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 TMEM8AQ9HCN3 771 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 DMAP1Q9NPF5 467 aaPredicted RBP10.6□□□□□ -0.71
RPA1-206ENST00000573994 SMPD4Q9NXE4 827 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 HOOK1Q9UJC3 728 aaKnown RBP10.6□□□□□ -0.71
RPA1-206ENST00000573994 FBXO4Q9UKT5 387 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 MIA3Q5JRA6 1907 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 ZNF840PA6NDX5 716 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 CETN3O15182 167 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
RPA1-206ENST00000573994 HDCP19113 662 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 YWHAQP27348 245 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 IFNAR2P48551 515 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 ZXDBP98169 803 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 SATB1Q01826 763 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 RUNX3Q13761 415 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 LRRC32Q14392 662 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 TCERG1LQ5VWI1 586 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 ANKRD40Q6AI12 368 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 ADSSL1Q8N142 457 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 SEMA4DQ92854 862 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 CHFRQ96EP1 664 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 SMARCD1Q96GM5 515 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 SMOQ99835 787 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 IER2Q9BTL4 223 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 SEMA4AQ9H3S1 761 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 C2orf42Q9NWW7 574 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 DUS2Q9NX74 493 aaKnown RBP10.59□□□□□ -0.71
RPA1-206ENST00000573994 GMIPQ9P107 970 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 MAN1B1Q9UKM7 699 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 ARHGAP26Q9UNA1 814 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 PCDHB3Q9Y5E6 796 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 CPQQ9Y646 472 aa10.59□□□□□ -0.71
RPA1-206ENST00000573994 EP300Q09472 2414 aaPredicted RBP10.58□□□□□ -0.72
RPA1-206ENST00000573994 LEFTY2O00292 366 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 BIN1O00499 593 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 SLC16A3O15427 465 aaKnown RBP10.58□□□□□ -0.72
RPA1-206ENST00000573994 BEST1O76090 585 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 OAS1P00973 400 aaKnown RBP10.58□□□□□ -0.72
RPA1-206ENST00000573994 LMNAP02545 664 aaKnown RBP10.58□□□□□ -0.72
RPA1-206ENST00000573994 FAM200BP0CF97 657 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 PFKLP17858 780 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 TRIM21P19474 475 aaKnown RBP10.58□□□□□ -0.72
RPA1-206ENST00000573994 HOXC13P31276 330 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 PPP3CCP48454 512 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 PDE6CP51160 858 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 MAP3K7CLP57077 242 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 DMWDQ09019 674 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 INCA1Q0VD86 236 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 PDGFRLQ15198 375 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 CBWD6Q4V339 395 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 ZNF394Q53GI3 561 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 CBWD3Q5JTY5 395 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 CBWD5Q5RIA9 395 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 KRT39Q6A163 491 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 KLHL10Q6JEL2 608 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 PKN3Q6P5Z2 889 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 GPRIN1Q7Z2K8 1008 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 UNC93AQ86WB7 457 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 ELOA2Q8IYF1 753 aaPredicted RBP10.58□□□□□ -0.72
RPA1-206ENST00000573994 NUP93Q8N1F7 819 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 CPA6Q8N4T0 437 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 CCDC150Q8NCX0 1101 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 ZMIZ2Q8NF64 920 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 SPATA20Q8TB22 786 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 OSCP1Q8WVF1 389 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 TIGD1Q96MW7 591 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 SLITRK1Q96PX8 696 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 ARID3AQ99856 593 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 HINFPQ9BQA5 517 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 DNAI2Q9GZS0 605 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 RNF38Q9H0F5 515 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 ECT2Q9H8V3 914 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 CFAP97Q9P2B7 532 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 CACNA1IQ9P0X4 2223 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 PATJQ8NI35 1801 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 FAM186AA6NE01 2351 aa10.58□□□□□ -0.72
RPA1-206ENST00000573994 ZNF292O60281 2723 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 OBSL1O75147 1896 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 KIF26AQ9ULI4 1882 aaPredicted RBP10.57□□□□□ -0.72
RPA1-206ENST00000573994 PTPRZ1P23471 2315 aaPredicted RBP10.57□□□□□ -0.72
RPA1-206ENST00000573994 PTPRDP23468 1912 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 TNFRSF10BO14763 440 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 CYP26A1O43174 497 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 CILPO75339 1184 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 RTN3O95197 1032 aaPredicted RBP10.57□□□□□ -0.72
RPA1-206ENST00000573994 EGFP01133 1207 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 MBL2P11226 248 aaPredicted RBP10.57□□□□□ -0.72
RPA1-206ENST00000573994 TDGF1P13385 188 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 GTF2H1P32780 548 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 PGFP49763 221 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 CCR3P51677 355 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 MCCD1P59942 119 aaPredicted RBP10.57□□□□□ -0.72
RPA1-206ENST00000573994 GRSF1Q12849 480 aaKnown RBP eCLIP10.57□□□□□ -0.72
RPA1-206ENST00000573994 CCINQ13939 588 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 EML3Q32P44 896 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 ZNF528Q3MIS6 628 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms