RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 KCNN4O15554 427 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 GLUD1P00367 558 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 DHX9Q08211 1270 aaKnown RBP10.54□□□□□ -0.72
SMG6-213ENST00000573166 CES5AQ6NT32 575 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 LLGL2Q6P1M3 1020 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 C3orf20Q8ND61 904 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 GDAP1Q8TB36 358 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 GPR152Q8TDT2 470 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 ZNF446Q9NWS9 450 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 AMACRQ9UHK6 382 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 AP4E1Q9UPM8 1137 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 NRXN2Q9P2S2 1712 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.54□□□□□ -0.72
SMG6-213ENST00000573166 POC1B-GALNT4F8VUJ3 575 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 GOLGA8MH3BSY2 632 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 NRP1O14786 923 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 ADAMTS4O75173 837 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 CILPO75339 1184 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 MAP3K6O95382 1288 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 CHRNA1P02708 482 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 CSH1P0DML2 217 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 CSH2P0DML3 217 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 TBX4P57082 545 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 FMO1Q01740 532 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 ZNF177Q13360 481 aaPredicted RBP10.54□□□□□ -0.72
SMG6-213ENST00000573166 KCNT2Q6UVM3 1135 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 TAS1R3Q7RTX0 852 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 DDX53Q86TM3 631 aaKnown RBP10.54□□□□□ -0.72
SMG6-213ENST00000573166 DDI1Q8WTU0 396 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 ARNTL2Q8WYA1 636 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 ZSWIM1Q9BR11 485 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 APOL5Q9BWW9 433 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 POPDC2Q9HBU9 364 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 WBP1LQ9NX94 342 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 RRN3Q9NYV6 651 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 LMCD1Q9NZU5 365 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 PHF24Q9UPV7 400 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 EP400Q96L91 3159 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 MBLAC1A4D2B0 266 aaPredicted RBP10.54□□□□□ -0.72
SMG6-213ENST00000573166 KRT14P02533 472 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 RFC2P35250 354 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 NUMBP49757 651 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 ZSCAN26Q16670 478 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 TIGD5Q53EQ6 642 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 VARS2Q5ST30 1063 aaKnown RBP10.54□□□□□ -0.72
SMG6-213ENST00000573166 CEP85LQ5SZL2 805 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 ATL2Q8NHH9 583 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 TMEM40Q8WWA1 233 aa10.54□□□□□ -0.72
SMG6-213ENST00000573166 CDK5RAP1Q96SZ6 601 aaKnown RBP10.54□□□□□ -0.72
SMG6-213ENST00000573166 OLA1Q9NTK5 396 aaKnown RBP10.54□□□□□ -0.72
SMG6-213ENST00000573166 A0A0U1RQJ8 604 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 ENPP3O14638 875 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 RGS16O15492 202 aaPredicted RBP10.53□□□□□ -0.72
SMG6-213ENST00000573166 CST5P28325 142 aaPredicted RBP10.53□□□□□ -0.72
SMG6-213ENST00000573166 ANO4Q32M45 955 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 CENPUQ71F23 418 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 IRF2BP2Q7Z5L9 587 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 PYROXD1Q8WU10 500 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 ATRIPQ8WXE1 791 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 ZNF516Q92618 1163 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 ATP2A3Q93084 1043 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 AGAP3Q96P47 875 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 CARD9Q9H257 536 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 SMARCAL1Q9NZC9 954 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 MARCH2Q9P0N8 246 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 GPR32O75388 356 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 PFKMP08237 780 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 COL6A1P12109 1028 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 RPL17P18621 184 aaKnown RBP10.53□□□□□ -0.72
SMG6-213ENST00000573166 KPNA1P52294 538 aaPredicted RBP10.53□□□□□ -0.72
SMG6-213ENST00000573166 PDK1Q15118 436 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 RABGAP1LQ5R372 815 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 KDELC2Q7Z4H8 507 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 NUP93Q8N1F7 819 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 RSPH1Q8WYR4 309 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 ARHGEF26Q96DR7 871 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 SERPINB11Q96P15 392 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 MCOLN1Q9GZU1 580 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 APOBEC3GQ9HC16 384 aaKnown RBP10.53□□□□□ -0.72
SMG6-213ENST00000573166 ASAH2Q9NR71 780 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMG6-213ENST00000573166 SQORQ9Y6N5 450 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 ECM29Q5VYK3 1845 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 A0A0A6YYK5 440 aaPredicted RBP10.53□□□□□ -0.72
SMG6-213ENST00000573166 ESYT3A0FGR9 886 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 CYP2F1P24903 491 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 ARSEP51690 589 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 EPHB4P54760 987 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 PDE1BQ01064 536 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMG6-213ENST00000573166 DUSP16Q9BY84 665 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 AVENQ9NQS1 362 aaPredicted RBP10.53□□□□□ -0.72
SMG6-213ENST00000573166 NFU1Q9UMS0 254 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 STXBP5LQ9Y2K9 1186 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 COQ4Q9Y3A0 265 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 MRPS23Q9Y3D9 190 aaKnown RBP10.53□□□□□ -0.72
SMG6-213ENST00000573166 RWDD3Q9Y3V2 267 aa10.53□□□□□ -0.72
SMG6-213ENST00000573166 LAMB1P07942 1786 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms