RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 FAM170BA6NMN3 283 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 LRRIQ3A6PVS8 624 aaPredicted RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 HEPACAM2A8MVW5 462 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 ZNF263O14978 683 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 HCRTO43612 131 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 NDUFB5O43674 189 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 ATP2C2O75185 946 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 TACC1O75410 805 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 F11P03951 625 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 C4BPAP04003 597 aaKnown RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 NR3C1P04150 777 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 CSH1P0DML2 217 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 CSH2P0DML3 217 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 HMGA1P17096 107 aaKnown RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 CD72P21854 359 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 WARSP23381 471 aaKnown RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 MPSTP25325 297 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 CDC25CP30307 473 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 GDI1P31150 447 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 CASP4P49662 377 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 GPR15P49685 360 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 MRE11P49959 708 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 RNF144AP50876 292 aaPredicted RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 MYL6P60660 151 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 SNRPNP63162 240 aaKnown RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 TNNC1P63316 161 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 BIRC3Q13489 604 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 KCNB1Q14721 858 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 MAPRE1Q15691 268 aaKnown RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 STXBP5Q5T5C0 1151 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 SDHAF4Q5VUM1 108 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 CEP135Q66GS9 1140 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 VITQ6UXI7 678 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 C4orf50Q6ZRC1 276 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 SCN4BQ8IWT1 228 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 YAF2Q8IY57 180 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 ALDH16A1Q8IZ83 802 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 PJA1Q8NG27 643 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 OR6B3Q8NGW1 331 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 PLEKHO2Q8TD55 490 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 RHBDD1Q8TEB9 315 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 DEPDC1BQ8WUY9 529 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 KBTBD7Q8WVZ9 684 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 DNASE1L2Q92874 299 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 SYAP1Q96A49 352 aaPredicted RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 FUBP3Q96I24 572 aaKnown RBP eCLIP7.94□□□□□ -1.14
NUP88-205ENST00000572809 GCNAQ96QF7 691 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 PKMYT1Q99640 499 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 MRPL45Q9BRJ2 306 aaKnown RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 DDX23Q9BUQ8 820 aaKnown RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 SLC46A2Q9BY10 475 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 OSBPL6Q9BZF3 934 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 FOXQ1Q9C009 403 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 SNX25Q9H3E2 840 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 TASP1Q9H6P5 420 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 ABCB6Q9NP58 842 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 TRPV5Q9NQA5 729 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 HEBP1Q9NRV9 189 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 FAM86C1Q9NVL1 165 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 CDH9Q9ULB4 789 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 MAGED2Q9UNF1 606 aaPredicted RBP7.94□□□□□ -1.14
NUP88-205ENST00000572809 MAPK8IP1Q9UQF2 711 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 TRAF3IP3Q9Y228 551 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 FRMD4BQ9Y2L6 1034 aa7.94□□□□□ -1.14
NUP88-205ENST00000572809 SLC38A8A6NNN8 435 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 MAN2B1O00754 1011 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 IKBKBO14920 756 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 CHADO15335 359 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 NCAM2O15394 837 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 OIP5O43482 229 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 LRRN2O75325 713 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 MX2P20592 715 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 RPL13P26373 211 aaKnown RBP7.93□□□□□ -1.14
NUP88-205ENST00000572809 GRIK1P39086 918 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 NLRP12P59046 1061 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 DLG4P78352 724 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 CYP4F8P98187 520 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 ADAM9Q13443 819 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 UBXN2BQ14CS0 331 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 ANGPT1Q15389 498 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 SGSM1Q2NKQ1 1148 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 CFAP221Q4G0U5 840 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 TDRD10Q5VZ19 366 aaKnown RBP7.93□□□□□ -1.14
NUP88-205ENST00000572809 VSTM1Q6UX27 236 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 ZNF852Q6ZMS4 543 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 TPRG1Q6ZUI0 275 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 TMEM150AQ86TG1 271 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 FMR1NBQ8N0W7 255 aaPredicted RBP7.93□□□□□ -1.14
NUP88-205ENST00000572809 GUF1Q8N442 669 aaKnown RBP7.93□□□□□ -1.14
NUP88-205ENST00000572809 MYCBPAPQ8TBZ2 947 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 MYRFLQ96LU7 910 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 SYT15Q9BQS2 421 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 GRIP2Q9C0E4 1043 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 XYLT2Q9H1B5 865 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 CRTAC1Q9NQ79 661 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 OBP2AQ9NY56 170 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 DLGAP2Q9P1A6 1054 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 UXTQ9UBK9 157 aaPredicted RBP7.93□□□□□ -1.14
NUP88-205ENST00000572809 ZMYM5Q9UJ78 669 aa7.93□□□□□ -1.14
NUP88-205ENST00000572809 MRPS17Q9Y2R5 130 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms