RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 WDR17Q8IZU2 1322 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 RGS12O14924 1447 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 PHGDHO43175 533 aaKnown RBP4.97□□□□□ -1.61
NUP88-202ENST00000570937 GRPP07492 148 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 WT1P19544 449 aaPredicted RBP4.97□□□□□ -1.61
NUP88-202ENST00000570937 ZNF134P52741 427 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 LOXL3P58215 753 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 IQCB1Q15051 598 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 FBXO42Q6P3S6 717 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 TMEM108Q6UXF1 575 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 MAEAQ7L5Y9 396 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 GRASPQ7Z6J2 395 aaPredicted RBP4.97□□□□□ -1.61
NUP88-202ENST00000570937 ZNF575Q86XF7 245 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 PCSK9Q8NBP7 692 aaKnown RBP4.97□□□□□ -1.61
NUP88-202ENST00000570937 IP6K1Q92551 441 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 RFKQ969G6 155 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 ACTRT3Q9BYD9 372 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 B3GNT5Q9BYG0 378 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 TPSD1Q9BZJ3 242 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 ZMAT3Q9HA38 289 aaKnown RBP4.97□□□□□ -1.61
NUP88-202ENST00000570937 ATP6V0A4Q9HBG4 840 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 XPR1Q9UBH6 696 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 CPA4Q9UI42 421 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 KAT6AQ92794 2004 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.97□□□□□ -1.61
NUP88-202ENST00000570937 SLIT3O75094 1523 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 CRB1P82279 1406 aa4.97□□□□□ -1.61
NUP88-202ENST00000570937 AKAP12Q02952 1782 aa4.96□□□□□ -1.61
NUP88-202ENST00000570937 NRKQ7Z2Y5 1582 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 COL5A2P05997 1499 aaPredicted RBP4.96□□□□□ -1.62
NUP88-202ENST00000570937 NSD2O96028 1365 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 KIF24Q5T7B8 1368 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 CCDC7Q96M83 1385 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 A0A1W2PPL8 197 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 FAM227AF5H4B4 570 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 EXOC5O00471 708 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 PPM1GO15355 546 aaPredicted RBP4.96□□□□□ -1.62
NUP88-202ENST00000570937 C1QL1O75973 258 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 CHRM2P08172 466 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 ELFN1P0C7U0 828 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 CYP2C9P11712 490 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 PPIFP30405 207 aaKnown RBP4.96□□□□□ -1.62
NUP88-202ENST00000570937 WNT3P56703 355 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 MLC1Q15049 377 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 VPS53Q5VIR6 699 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 ICE2Q659A1 982 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 DTX2Q86UW9 622 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 BOLLQ8N9W6 283 aaKnown RBP4.96□□□□□ -1.62
NUP88-202ENST00000570937 NELL1Q92832 810 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 FKBP10Q96AY3 582 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 UROC1Q96N76 676 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 NT5C1BQ96P26 610 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 PTDSS2Q9BVG9 487 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 TTYH3Q9C0H2 523 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 KIAA1586Q9HCI6 787 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 EHD3Q9NZN3 535 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 L1RE1Q9UN81 338 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.96□□□□□ -1.62
NUP88-202ENST00000570937 MON2Q7Z3U7 1717 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 ABCA3Q99758 1704 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 ABCC6O95255 1503 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 BLMP54132 1417 aaPredicted RBP4.96□□□□□ -1.62
NUP88-202ENST00000570937 SMG6Q86US8 1419 aaKnown RBP4.96□□□□□ -1.62
NUP88-202ENST00000570937 KIF7Q2M1P5 1343 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 PIK3C2AO00443 1686 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 PLCH1Q4KWH8 1693 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 CAMTA1Q9Y6Y1 1673 aa4.96□□□□□ -1.62
NUP88-202ENST00000570937 RTL1A6NKG5 1358 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 PHRF1Q9P1Y6 1649 aaKnown RBP4.95□□□□□ -1.62
NUP88-202ENST00000570937 A0A087WWL8 130 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 CAPN8A6NHC0 703 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 FRS3O43559 492 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 PROP1O75360 226 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 RHOP08100 348 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 HOXC9P31274 260 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 PXNP49023 591 aaPredicted RBP4.95□□□□□ -1.62
NUP88-202ENST00000570937 PTH2RP49190 550 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 SLC11A2P49281 568 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 SOX10P56693 466 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 NHLH1Q02575 133 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 TEDDM1Q5T9Z0 273 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 SWSAP1Q6NVH7 229 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 LAYNQ6UX15 382 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 RD3Q7Z3Z2 195 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 MORC1Q86VD1 984 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 MYO1HQ8N1T3 1032 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.95□□□□□ -1.62
NUP88-202ENST00000570937 IL31RAQ8NI17 732 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 NTN5Q8WTR8 489 aaPredicted RBP4.95□□□□□ -1.62
NUP88-202ENST00000570937 ANKS1AQ92625 1134 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 LTV1Q96GA3 475 aaPredicted RBP4.95□□□□□ -1.62
NUP88-202ENST00000570937 ZNF764Q96H86 408 aaPredicted RBP4.95□□□□□ -1.62
NUP88-202ENST00000570937 P2RX7Q99572 595 aaKnown RBP4.95□□□□□ -1.62
NUP88-202ENST00000570937 KLK15Q9H2R5 256 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 SERHLQ9NQF3 203 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.95□□□□□ -1.62
NUP88-202ENST00000570937 G3BP2Q9UN86 482 aaKnown RBP4.95□□□□□ -1.62
NUP88-202ENST00000570937 TMX2Q9Y320 296 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 OVOS2A0A0J9YW53 1432 aa4.95□□□□□ -1.62
NUP88-202ENST00000570937 OVOS2Q6IE36 1432 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms