RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 FBXO32Q969P5 355 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 MYLPFQ96A32 169 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 CFAP57Q96MR6 1250 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 EPAS1Q99814 870 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 LPIN3Q9BQK8 851 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 STMN4Q9H169 189 aaPredicted RBP12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 LHX5Q9H2C1 402 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 C11orf49Q9H6J7 331 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 FAM187AA6NFU0 413 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 PARNO95453 639 aaKnown RBP12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 C10orf120Q5SQS8 335 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 CREG2Q8IUH2 290 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 ZDHHC17Q8IUH5 632 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 ADAM32Q8TC27 787 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 ACTRT1Q8TDG2 376 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 XYLT2Q9H1B5 865 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 MLXIPLQ9NP71 852 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 TMEM161AQ9NX61 479 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 COG5Q9UP83 839 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 PCDHA3Q9Y5H8 950 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 MEIS3P2A8K0S8 358 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 GPS1Q13098 491 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 C15orf59Q2T9L4 293 aaPredicted RBP12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 MIB1Q86YT6 1006 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 MMGT1Q8N4V1 131 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 PDCD6IPQ8WUM4 868 aaKnown RBP12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 HSFY1Q96LI6 401 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 B3GNT5Q9BYG0 378 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 WDCPQ9H6R7 721 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 TRPC7Q9HCX4 862 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 FAM8A1Q9UBU6 413 aa12.68□□□□□ -0.38
TMEM170A-205ENST00000568559 CST5P28325 142 aaPredicted RBP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 MARCKSL1P49006 195 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 ROR1Q01973 937 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 SKIV2LQ15477 1246 aaKnown RBP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 TIGD5Q53EQ6 642 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 AADACL2Q6P093 401 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 WHAMMQ8TF30 809 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 CYP4F11Q9HBI6 524 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 ANKRD65E5RJM6 399 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 ERBB2P04626 1255 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 CYP1A1P04798 512 aaPredicted RBP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 IVLP07476 585 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 OR4Q2P0C623 313 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 AP1B1Q10567 949 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 CASP8Q14790 479 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 EMBQ6PCB8 327 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 EXD1Q8NHP7 514 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 SPATA18Q8TC71 538 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 ZNF558Q96NG5 402 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 ERVK-5Q9HDB9 667 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 CALCOCO1Q9P1Z2 691 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 MCM3APO60318 1980 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 CTIFO43310 598 aaKnown RBP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 ACRP10323 421 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 ZFXP17010 805 aaPredicted RBP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 OAS2P29728 719 aaKnown RBP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 MIPP30301 263 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 YWHAGP61981 247 aaKnown RBP eCLIP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 BYSLQ13895 437 aaKnown RBP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 CCDC14Q49A88 953 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 FAM35AQ86V20 835 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 DDX42Q86XP3 938 aaKnown RBP eCLIP12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 LRRC43Q8N309 656 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 KLHDC9Q8NEP7 349 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 GPR88Q9GZN0 384 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 SDCBP2Q9H190 292 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 PCDHGC3Q9UN70 934 aa12.67□□□□□ -0.38
TMEM170A-205ENST00000568559 TARSL2A2RTX5 802 aaKnown RBP12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 EEF2KO00418 725 aaKnown RBP12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 CLTBP09497 229 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 ARSEP51690 589 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 CLDN10P78369 228 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 ATP13A4Q4VNC1 1196 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 TFDP3Q5H9I0 405 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 AGMOQ6ZNB7 445 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 B4GALNT4Q76KP1 1039 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 MON1BQ7L1V2 547 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 JOSD2Q8TAC2 188 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 FAF2Q96CS3 445 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 DUSP16Q9BY84 665 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 KIF9Q9HAQ2 790 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 WDR90Q96KV7 1748 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 PDE2AO00408 941 aaPredicted RBP12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 RBP3P10745 1247 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 UNGP13051 313 aaPredicted RBP12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 PBX3P40426 434 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 BBS9Q3SYG4 887 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 FBXO46Q6PJ61 603 aaPredicted RBP12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 JAMLQ86YT9 394 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 SKA2Q8WVK7 121 aaPredicted RBP12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 FAXDC2Q96IV6 333 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 KLHL8Q9P2G9 620 aaPredicted RBP12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 NUDT5Q9UKK9 219 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 HCRTO43612 131 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 SOX4Q06945 474 aaPredicted RBP12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 PMF1Q6P1K2 205 aa12.66□□□□□ -0.38
TMEM170A-205ENST00000568559 SPOCD1Q6ZMY3 1216 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms