RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 CCDC30Q5VVM6 783 aa8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 NSUN6Q8TEA1 469 aaKnown RBP8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 PDLIM2Q96JY6 352 aa8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 VRK1Q99986 396 aaPredicted RBP8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 GLIS2Q9BZE0 524 aaPredicted RBP8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 IMPG2Q9BZV3 1241 aa8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 KIAA1586Q9HCI6 787 aa8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 INTS13Q9NVM9 706 aa8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CTTNBP2NLQ9P2B4 639 aa8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CNOT7Q9UIV1 285 aaKnown RBP8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 DUOX1Q9NRD9 1551 aa8.63□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 ECE2O60344 883 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CELF2O95319 508 aaKnown RBP8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 DDX58O95786 925 aaKnown RBP8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 PCCAP05165 728 aaPredicted RBP8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CTCFP49711 727 aaPredicted RBP8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 LBX1P52954 281 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 KHDC1Q4VXA5 237 aaKnown RBP8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 ZNF362Q5T0B9 420 aaPredicted RBP8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 SYCE2Q6PIF2 218 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 DLK2Q6UY11 383 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 BOLLQ8N9W6 283 aaKnown RBP8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 FAM98AQ8NCA5 519 aaKnown RBP8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CCDC191Q8NCU4 936 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 SLC17A8Q8NDX2 589 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 TMIEQ8NEW7 156 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 TBC1D16Q8TBP0 767 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 NELL1Q92832 810 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CAPNS2Q96L46 248 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CWC25Q9NXE8 425 aaPredicted RBP8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 SPEF1Q9Y4P9 236 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 COL4A3BPQ9Y5P4 624 aa8.62□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CDHR2Q9BYE9 1310 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 LRRC37AA6NMS7 1700 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 PI4KAP2A4QPH2 592 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 MASP2O00187 686 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 UFL1O94874 794 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 MALP21145 153 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CD38P28907 300 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 FOLR3P41439 243 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 DSC2Q02487 901 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 PIGFQ07326 219 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CCDC152Q4G0S7 254 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 G2E3Q7L622 706 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CFAP52Q8N1V2 620 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 MIER2Q8N344 545 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 PI4KAP1Q8N8J0 262 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 VOPP1Q96AW1 172 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 EYA3Q99504 573 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 SMAD5Q99717 465 aaKnown RBP8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 ASPSCR1Q9BZE9 553 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 PCDH12Q9NPG4 1184 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 PGAP2Q9UHJ9 254 aa8.61□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 ARHGEF17Q96PE2 2063 aaPredicted RBP8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CCDC195A0A1B0GUA6 201 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 MGST3O14880 152 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 YY2O15391 372 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 HSPA8P11142 646 aaKnown RBP8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 GATA3P23771 443 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CACNA2D1P54289 1103 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 MRPS21P82921 87 aaKnown RBP8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 MAP2K1Q02750 393 aaPredicted RBP8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 SNAPC2Q13487 334 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 DYRK1AQ13627 763 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 TWISTNBQ3B726 338 aaPredicted RBP8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CD300EQ496F6 205 aaPredicted RBP8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 VWA1Q6PCB0 445 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 KSR2Q6VAB6 950 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 PDPRQ8NCN5 879 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 NSUN7Q8NE18 718 aaKnown RBP8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 STK31Q9BXU1 1019 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 RTL9Q8NET4 1388 aa8.6□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 F2RL2O00254 374 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 SUN1O94901 812 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 ZRANB2O95218 330 aaKnown RBP eCLIP8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 IGKV5-2P06315 115 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 ANXA11P50995 505 aaKnown RBP8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 C21orf58P58505 322 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 PREPLQ4J6C6 727 aaPredicted RBP8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 KIAA0895LQ68EN5 471 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 ANKRD18AQ8IVF6 992 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 HEPHQ9BQS7 1158 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 LRFN3Q9BTN0 628 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 CHMP4AQ9BY43 222 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 SIDT1Q9NXL6 827 aaKnown RBP8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 TRPM7Q96QT4 1865 aa8.59□□□□□ -1.03
DNAAF4-CCPG1-202ENST00000568310 TOR1BO14657 336 aa8.58□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 RPS12P25398 132 aaKnown RBP8.58□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 CYP2C19P33261 490 aa8.58□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 POU6F2P78424 691 aaPredicted RBP8.58□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 NEXNQ0ZGT2 675 aa8.58□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 SLC4A10Q6U841 1118 aa8.58□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 SLC30A5Q8TAD4 765 aa8.58□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 SEMA4GQ9NTN9 838 aa8.58□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 ASTN2O75129 1339 aaPredicted RBP8.57□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 NT5C1B-RDH14C9J2C7 533 aa8.57□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 ADM5C9JUS6 153 aa8.57□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 PROM1O43490 865 aa8.57□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 IGLV2-14P01704 120 aa8.57□□□□□ -1.04
DNAAF4-CCPG1-202ENST00000568310 SMARCA1P28370 1054 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms