RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 CILPO75339 1184 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 FGF19O95750 216 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 ARSAP15289 507 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 HDCP19113 662 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 HOXC13P31276 330 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 RAD23BP54727 409 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 ARHGAP8P85298 464 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 ZXDBP98169 803 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 SATB1Q01826 763 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 LRRC32Q14392 662 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 PPP1R26Q5T8A7 1209 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-211ENST00000568291 NAIF1Q69YI7 327 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-211ENST00000568291 LAIR1Q6GTX8 287 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 TXNDC11Q6PKC3 985 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 PRR23BQ6ZRT6 265 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 RRAGAQ7L523 313 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 ARHGEF19Q8IW93 802 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 SLC4A11Q8NBS3 891 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 CCDC150Q8NCX0 1101 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 CSGALNACT1Q8TDX6 532 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 E2F7Q96AV8 911 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 TRMT2BQ96GJ1 504 aaKnown RBP10.07□□□□□ -0.8
SF3B3-211ENST00000568291 MSANTD3Q96H12 275 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 SPATA17Q96L03 361 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 CEP63Q96MT8 703 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 NT5C1AQ9BXI3 368 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 NUP62CLQ9H1M0 184 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 LINC00597Q9H2U6 94 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 EBF3Q9H4W6 596 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 CYP3A43Q9HB55 503 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 TDP1Q9NUW8 608 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 DNAH14Q0VDD8 3507 aa10.07□□□□□ -0.8
SF3B3-211ENST00000568291 HELZP42694 1942 aaKnown RBP10.07□□□□□ -0.8
SF3B3-211ENST00000568291 BICDL2A1A5D9 508 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 ZNF840PA6NDX5 716 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 TNFRSF10BO14763 440 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 CHADO15335 359 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 CKMP06732 381 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 CHRNB1P11230 501 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 YWHAQP27348 245 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 KPNA1P52294 538 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-211ENST00000568291 SLC5A3P53794 718 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 ATXN1P54253 815 aaKnown RBP10.06□□□□□ -0.8
SF3B3-211ENST00000568291 SPEM2Q0P670 501 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 INCA1Q0VD86 236 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 KCNH2Q12809 1159 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 CUL2Q13617 745 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 GJB7Q6PEY0 223 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 CLEC17AQ6ZS10 378 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 Q6ZS52 159 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 CLEC20AQ6ZU45 233 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 UNC93AQ86WB7 457 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 IRF2BP1Q8IU81 584 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 TRIM59Q8IWR1 403 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 NUP93Q8N1F7 819 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 SPEM1Q8N4L4 309 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 CELF5Q8N6W0 485 aaKnown RBP10.06□□□□□ -0.8
SF3B3-211ENST00000568291 BPIFB1Q8TDL5 484 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 NDRG1Q92597 394 aaKnown RBP10.06□□□□□ -0.8
SF3B3-211ENST00000568291 FBXO32Q969P5 355 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 WBP2Q969T9 261 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 SMARCD1Q96GM5 515 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 TMEM176AQ96HP8 235 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 CRACR2AQ9BSW2 395 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 GTPBP4Q9BZE4 634 aaKnown RBP10.06□□□□□ -0.8
SF3B3-211ENST00000568291 CCSER2Q9H7U1 834 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 METTL14Q9HCE5 456 aaKnown RBP10.06□□□□□ -0.8
SF3B3-211ENST00000568291 DMAP1Q9NPF5 467 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-211ENST00000568291 RBM12Q9NTZ6 932 aaKnown RBP10.06□□□□□ -0.8
SF3B3-211ENST00000568291 TRPM5Q9NZQ8 1165 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 GMIPQ9P107 970 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 GCNT4Q9P109 453 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 UXTQ9UBK9 157 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-211ENST00000568291 RWDD2AQ9UIY3 292 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 NUDT5Q9UKK9 219 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 COQ4Q9Y3A0 265 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 WNT6Q9Y6F9 365 aa10.06□□□□□ -0.8
SF3B3-211ENST00000568291 TRAV19A0A0A6YYK7 116 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 FAM170AA1A519 330 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 DCDC2BA2VCK2 349 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 ANTXRLA6NF34 631 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 CHURC1-FNTBB4DL54 471 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 HHLA1C9JL84 531 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 RNF225M0QZC1 329 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-211ENST00000568291 TULP2O00295 520 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 TBX18O95935 607 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 FAM200BP0CF97 657 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 CD19P15391 556 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 ACO1P21399 889 aaKnown RBP10.05□□□□□ -0.8
SF3B3-211ENST00000568291 TGM1P22735 817 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 CTHP32929 405 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 CXCL12P48061 93 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 FNTBP49356 437 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 ENPEPQ07075 957 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 DMWDQ09019 674 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 GAS6Q14393 721 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 C1orf228Q6PIY5 440 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 MAMSTRQ6ZN01 415 aa10.05□□□□□ -0.8
SF3B3-211ENST00000568291 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms