RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 PFKLP17858 780 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 TDGQ13569 410 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 ANGPT1Q15389 498 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 SFMBT2Q5VUG0 894 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 PPP1R2P3Q6NXS1 205 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 TRIM72Q6ZMU5 477 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 PDZD4Q76G19 769 aaPredicted RBP17.63■□□□□ 0.41
CLN6-208ENST00000567060 SLC47A2Q86VL8 602 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 TTC30AQ86WT1 665 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 SCML4Q8N228 414 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 PDZD8Q8NEN9 1154 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 ZMIZ2Q8NF64 920 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 EPS8L1Q8TE68 723 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 SLC35F5Q8WV83 523 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 NOX5Q96PH1 765 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 KCNK12Q9HB15 430 aa17.63■□□□□ 0.41
CLN6-208ENST00000567060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.63■□□□□ 0.412e-9■■■■■ 36.3
CLN6-208ENST00000567060 DNMT3BQ9UBC3 853 aaKnown RBP17.63■□□□□ 0.41
CLN6-208ENST00000567060 C2orf16Q68DN1 1984 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 M0QYV0 167 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 TNFRSF10BO14763 440 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 GFPT2O94808 682 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 RHOP08100 348 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 HMGA1P17096 107 aaKnown RBP17.62■□□□□ 0.41
CLN6-208ENST00000567060 DDX6P26196 483 aaKnown RBP eCLIP17.62■□□□□ 0.412e-8■■□□□ 11.6
CLN6-208ENST00000567060 CDH5P33151 784 aaPredicted RBP17.62■□□□□ 0.41
CLN6-208ENST00000567060 PRKCIP41743 596 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 ACADSBP45954 432 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 RPL34P49207 117 aaKnown RBP17.62■□□□□ 0.41
CLN6-208ENST00000567060 ZNF75DP51815 510 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 MAP3K7CLP57077 242 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 ARID5BQ14865 1188 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 DRC7Q8IY82 874 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 DTWD2Q8NBA8 298 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 SLITRK1Q96PX8 696 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 GCNAQ96QF7 691 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 KCNK16Q96T55 309 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 ZSWIM1Q9BR11 485 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 LRRC3Q9BY71 257 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 MIS12Q9H081 205 aa17.62■□□□□ 0.41
CLN6-208ENST00000567060 DENND4AQ7Z401 1863 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 LRRC53A6NM62 1247 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 HHLA1C9JL84 531 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 SOAT2O75908 522 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 GYPCP04921 128 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 YWHAQP27348 245 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 CDC25BP30305 580 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 HNRNPH3P31942 346 aaKnown RBP17.61■□□□□ 0.41
CLN6-208ENST00000567060 GPD2P43304 727 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 SLC5A3P53794 718 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 CACNA2D1P54289 1103 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 CDR2Q01850 454 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 PDE4CQ08493 712 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 RAB41Q5JT25 222 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.61■□□□□ 0.41
CLN6-208ENST00000567060 GRASPQ7Z6J2 395 aaPredicted RBP17.61■□□□□ 0.41
CLN6-208ENST00000567060 PIGZQ86VD9 579 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 TMC8Q8IU68 726 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 CNGA4Q8IV77 575 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 TMEM35BQ8NCS4 154 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 DDX1Q92499 740 aaKnown RBP17.61■□□□□ 0.41
CLN6-208ENST00000567060 ACSF2Q96CM8 615 aaPredicted RBP17.61■□□□□ 0.41
CLN6-208ENST00000567060 CORO1BQ9BR76 489 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 PDCL3Q9H2J4 239 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 TMEM30AQ9NV96 361 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 NOCTQ9UK39 431 aaKnown RBP17.61■□□□□ 0.41
CLN6-208ENST00000567060 DUSP12Q9UNI6 340 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 USP3Q9Y6I4 520 aa17.61■□□□□ 0.41
CLN6-208ENST00000567060 SART1O43290 800 aaKnown RBP17.6■□□□□ 0.41
CLN6-208ENST00000567060 AP5Z1O43299 807 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 NARSO43776 548 aaKnown RBP17.6■□□□□ 0.41
CLN6-208ENST00000567060 BEST1O76090 585 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 FSHRP23945 695 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 GPR15P49685 360 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 PSEN1P49768 467 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 KIF11P52732 1056 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 ASIC2Q16515 512 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 TSR1Q2NL82 804 aaKnown RBP17.6■□□□□ 0.41
CLN6-208ENST00000567060 PRSS36Q5K4E3 855 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 OTOP3Q7RTS5 596 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 IRF2BP2Q7Z5L9 587 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 SIX5Q8N196 739 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 MSANTD4Q8NCY6 345 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 GIPC2Q8TF65 315 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 SECISBP2LQ93073 1101 aaKnown RBP17.6■□□□□ 0.41
CLN6-208ENST00000567060 LRRC4Q9HBW1 653 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 CNGB3Q9NQW8 809 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 GDE1Q9NZC3 331 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 SCML2Q9UQR0 700 aa17.6■□□□□ 0.41
CLN6-208ENST00000567060 MRPS23Q9Y3D9 190 aaKnown RBP17.6■□□□□ 0.41
CLN6-208ENST00000567060 ZNF638Q14966 1978 aaKnown RBP17.59■□□□□ 0.41
CLN6-208ENST00000567060 KRBA1A5PL33 1030 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 GOLGA6L3A6NEY3 463 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 FBXO21O94952 628 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 PNMA6AP0CW24 399 aaPredicted RBP17.59■□□□□ 0.41
CLN6-208ENST00000567060 WEE1P30291 646 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 CASP14P31944 242 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 ARHGAP15Q53QZ3 475 aa17.59■□□□□ 0.41
CLN6-208ENST00000567060 SNX30Q5VWJ9 437 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms