RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SMYD5Q6GMV2 418 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 C1orf228Q6PIY5 440 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 PAQR9Q6ZVX9 377 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 LRRC8AQ8IWT6 810 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 NEK11Q8NG66 645 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 SLC2A14Q8TDB8 520 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 OVCA2Q8WZ82 227 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 CYFIP2Q96F07 1278 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 MSANTD3Q96H12 275 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 NT5C1BQ96P26 610 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 PANX2Q96RD6 677 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 HNRNPABQ99729 332 aaKnown RBP14.2□□□□□ -0.14
CLK3-218ENST00000566926 NAA15Q9BXJ9 866 aaKnown RBP14.2□□□□□ -0.14
CLK3-218ENST00000566926 OSBPL6Q9BZF3 934 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 CSNK1G1Q9HCP0 422 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 TRPC7Q9HCX4 862 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 KRT82Q9NSB4 513 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 CISHQ9NSE2 258 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 FAM49BQ9NUQ9 324 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 HMGXB4Q9UGU5 601 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 CAPN11Q9UMQ6 739 aa14.2□□□□□ -0.14
CLK3-218ENST00000566926 LUC7L2Q9Y383 392 aaKnown RBP14.2□□□□□ -0.14
CLK3-218ENST00000566926 KANSL1LA0AUZ9 987 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 NCAM2O15394 837 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 MFAP3LO75121 409 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 TADA3O75528 432 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 GYPCP04921 128 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 CKMP06732 381 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 CCDC130P13994 396 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 HDCP19113 662 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 ORC1Q13415 861 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 CUL2Q13617 745 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 CWF19L1Q69YN2 538 aaKnown RBP14.19□□□□□ -0.14
CLK3-218ENST00000566926 ZNF852Q6ZMS4 543 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 TPRG1Q6ZUI0 275 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 C12orf29Q8N999 325 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 WHAMMQ8TF30 809 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 TATDN2Q93075 761 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 FBXO32Q969P5 355 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 TMEM176AQ96HP8 235 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 FAM81BQ96LP2 452 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 HEXIM2Q96MH2 286 aaKnown RBP14.19□□□□□ -0.14
CLK3-218ENST00000566926 KCNK16Q96T55 309 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 FBXO44Q9H4M3 255 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 PNPLA8Q9NP80 782 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 MYO6Q9UM54 1294 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 SIT1Q9Y3P8 196 aa14.19□□□□□ -0.14
CLK3-218ENST00000566926 LRRN2O75325 713 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 PRAMEF12O95522 483 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 ADORA2BP29275 332 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 MAGEA9P43362 315 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 CACNA2D1P54289 1103 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 PTPN5P54829 565 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 SLC8A3P57103 927 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 USP46P62068 366 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 ZBED6P86452 979 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 IFRD2Q12894 506 aaPredicted RBP14.18□□□□□ -0.14
CLK3-218ENST00000566926 TAF10Q12962 218 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 ARID5BQ14865 1188 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 ZNF394Q53GI3 561 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 CC2D1AQ6P1N0 951 aaPredicted RBP14.18□□□□□ -0.14
CLK3-218ENST00000566926 GPIHBP1Q8IV16 184 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 TMEM105Q8N8V8 129 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 PJA1Q8NG27 643 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 USP13Q92995 863 aaPredicted RBP14.18□□□□□ -0.14
CLK3-218ENST00000566926 TWNKQ96RR1 684 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 DDX23Q9BUQ8 820 aaKnown RBP14.18□□□□□ -0.14
CLK3-218ENST00000566926 TTYH3Q9C0H2 523 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 C8orf33Q9H7E9 229 aaPredicted RBP14.18□□□□□ -0.14
CLK3-218ENST00000566926 HEBP1Q9NRV9 189 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 ZNHIT6Q9NWK9 470 aaKnown RBP14.18□□□□□ -0.14
CLK3-218ENST00000566926 GCNT4Q9P109 453 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 RAPGEFL1Q9UHV5 662 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 COL4A2P08572 1712 aa14.18□□□□□ -0.14
CLK3-218ENST00000566926 NCANO14594 1321 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 CACNA1IQ9P0X4 2223 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 ZNF840PA6NDX5 716 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 TNFRSF10BO14763 440 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 GALR2O43603 387 aaPredicted RBP14.17□□□□□ -0.14
CLK3-218ENST00000566926 ABL1P00519 1130 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 TCF3P15923 654 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 CASP14P31944 242 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 KPNA1P52294 538 aaPredicted RBP14.17□□□□□ -0.14
CLK3-218ENST00000566926 SLC5A3P53794 718 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 MAP3K7CLP57077 242 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 LRMPQ12912 555 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 UBXN2BQ14CS0 331 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 CACNA2D4Q7Z3S7 1137 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 ZSCAN30Q86W11 494 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 ARL14EPQ8N8R7 260 aaPredicted RBP14.17□□□□□ -0.14
CLK3-218ENST00000566926 TC2NQ8N9U0 490 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 EHBP1Q8NDI1 1231 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 OR8K1Q8NGG5 319 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 SYN2Q92777 582 aaPredicted RBP14.17□□□□□ -0.14
CLK3-218ENST00000566926 RSPRY1Q96DX4 576 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 DNAJC7Q99615 494 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 SMOQ99835 787 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 DUSP16Q9BY84 665 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 LTB4R2Q9NPC1 389 aa14.17□□□□□ -0.14
CLK3-218ENST00000566926 TMEM30AQ9NV96 361 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms