RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 PMS1P54277 932 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 CLDN10P78369 228 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 LRMPQ12912 555 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 USP4Q13107 963 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 RUNX3Q13761 415 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 ZNF77Q15935 545 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 LPAL2Q16609 132 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 EDRF1Q3B7T1 1238 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 ZCWPW2Q504Y3 356 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 NAIF1Q69YI7 327 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 KRT39Q6A163 491 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 ANKRD40Q6AI12 368 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 LAPTM4BQ86VI4 370 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 RALGPS2Q86X27 583 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 FUKQ8N0W3 1084 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 C12orf29Q8N999 325 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 ENGASEQ8NFI3 743 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 SCAMP5Q8TAC9 235 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 ATRIPQ8WXE1 791 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 TAF4BQ92750 862 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 CLDN23Q96B33 292 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 C8orf48Q96LL4 319 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 MYRFLQ96LU7 910 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 GSDMAQ96QA5 445 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 TWNKQ96RR1 684 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 CHRDQ9H2X0 955 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 TMEM8AQ9HCN3 771 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 GMIPQ9P107 970 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 CFAP97Q9P2B7 532 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 MAN1B1Q9UKM7 699 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 SDK1Q7Z5N4 2213 aa10.72□□□□□ -0.69
GTF3C1-206ENST00000566779 ZNF840PA6NDX5 716 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 LEFTY2O00292 366 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 MAPK13O15264 365 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 STX10O60499 249 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 RTN3O95197 1032 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 ANP32AP39687 249 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 RPS9P46781 194 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 PDE6CP51160 858 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 CCR3P51677 355 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 STX17P56962 302 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 SATB1Q01826 763 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 PDGFRLQ15198 375 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 NFIL3Q16649 462 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 WDR44Q5JSH3 913 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 PRR23BQ6ZRT6 265 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 CREBRFQ8IUR6 639 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 MAML2Q8IZL2 1156 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 NUP93Q8N1F7 819 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 NELFBQ8WX92 580 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 MYO18AQ92614 2054 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 SEMA4DQ92854 862 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 ATP2A3Q93084 1043 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 MSANTD3Q96H12 275 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 CALR3Q96L12 384 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 NT5C1AQ9BXI3 368 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 DNAI2Q9GZS0 605 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 VRTNQ9H8Y1 702 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 TRPV5Q9NQA5 729 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 GCNT4Q9P109 453 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 NCDNQ9UBB6 729 aa10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 CHORDC1Q9UHD1 332 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-206ENST00000566779 EP300Q09472 2414 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 OTOL1A6NHN0 477 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 CFAP99D6REC4 459 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 SLC16A3O15427 465 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 CYP26A1O43174 497 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 BEST1O76090 585 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 LMNAP02545 664 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 FAM163BP0C2L3 166 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 CHRNB1P11230 501 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 WEE1P30291 646 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 CXCL12P48061 93 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 SEC13P55735 322 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 FKBP3Q00688 224 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 GRSF1Q12849 480 aaKnown RBP eCLIP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 FZD5Q13467 585 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 ZNF268Q14587 947 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 PPP2R5DQ14738 602 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 CAMK4Q16566 473 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 C1orf228Q6PIY5 440 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 PAQR9Q6ZVX9 377 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 GPRIN1Q7Z2K8 1008 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 FILIP1Q7Z7B0 1213 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 UNC93AQ86WB7 457 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 FBXL13Q8NEE6 735 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 OSCP1Q8WVF1 389 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 GLMNQ92990 594 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 CHFRQ96EP1 664 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 HEXIM2Q96MH2 286 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 TIGD1Q96MW7 591 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 SMOQ99835 787 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 P2RY13Q9BPV8 354 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 FAM83CQ9BQN1 747 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 TTLL2Q9BWV7 592 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 CCSER2Q9H7U1 834 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 ECT2Q9H8V3 914 aa10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 PRMT8Q9NR22 394 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 ARMCX3Q9UH62 379 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-206ENST00000566779 FBXO4Q9UKT5 387 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms