RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 YME1L1Q96TA2 773 aa17.63■□□□□ 0.41
RAB40C-210ENST00000566290 ADAM2Q99965 735 aa17.63■□□□□ 0.41
RAB40C-210ENST00000566290 AMACRQ9UHK6 382 aa17.63■□□□□ 0.41
RAB40C-210ENST00000566290 NR2E1Q9Y466 385 aa17.63■□□□□ 0.41
RAB40C-210ENST00000566290 ZFHX2Q9C0A1 2572 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-210ENST00000566290 ZNF487B1APH4 448 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 THP07101 528 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 LINC00271P0C7V0 271 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 RARAP10276 462 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 COILP38432 576 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-210ENST00000566290 ACADSBP45954 432 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 ZNF143P52747 638 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-210ENST00000566290 ERVK-21P61565 698 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 OGDHQ02218 1023 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 ZP2Q05996 745 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 BST2Q10589 180 aaKnown RBP17.62■□□□□ 0.41
RAB40C-210ENST00000566290 SMC1AQ14683 1233 aaKnown RBP17.62■□□□□ 0.41
RAB40C-210ENST00000566290 HADHQ16836 314 aaKnown RBP17.62■□□□□ 0.41
RAB40C-210ENST00000566290 GOLGA7BQ2TAP0 167 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 C2CD6Q53TS8 623 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 LLGL2Q6P1M3 1020 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 CPNE8Q86YQ8 564 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 ZDHHC14Q8IZN3 488 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 RSPH1Q8WYR4 309 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 MAGOHBQ96A72 148 aaKnown RBP17.62■□□□□ 0.41
RAB40C-210ENST00000566290 LRRC45Q96CN5 670 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 ZNF689Q96CS4 500 aaPredicted RBP17.62■□□□□ 0.41
RAB40C-210ENST00000566290 CNPY3Q9BT09 278 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 FTHL17Q9BXU8 183 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 OSBPL8Q9BZF1 889 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 TSC2P49815 1807 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 TECTAO75443 2155 aa17.62■□□□□ 0.41
RAB40C-210ENST00000566290 ARHGEF37A1IGU5 675 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 C19orf67A6NJJ6 358 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 SPTLC1O15269 473 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 TTI1O43156 1089 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 ZMYND10O75800 440 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 DGKIO75912 1065 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 RFC1P35251 1148 aaPredicted RBP17.61■□□□□ 0.41
RAB40C-210ENST00000566290 SLC25A11Q02978 314 aaKnown RBP17.61■□□□□ 0.41
RAB40C-210ENST00000566290 GABPB1Q06547 395 aaPredicted RBP17.61■□□□□ 0.41
RAB40C-210ENST00000566290 GRIK3Q13003 919 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 PUS10Q3MIT2 529 aaKnown RBP17.61■□□□□ 0.41
RAB40C-210ENST00000566290 PPP1R26Q5T8A7 1209 aaPredicted RBP17.61■□□□□ 0.41
RAB40C-210ENST00000566290 CCDC137Q6PK04 289 aaKnown RBP17.61■□□□□ 0.41
RAB40C-210ENST00000566290 AGMOQ6ZNB7 445 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 TTC30AQ86WT1 665 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 ADGRF2Q8IZF7 708 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 FAM71BQ8TC56 605 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 SLITRK1Q96PX8 696 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 TGS1Q96RS0 853 aaKnown RBP17.61■□□□□ 0.41
RAB40C-210ENST00000566290 HNRNPABQ99729 332 aaKnown RBP17.61■□□□□ 0.41
RAB40C-210ENST00000566290 APOL6Q9BWW8 343 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 SNX25Q9H3E2 840 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 SYNCQ9H7C4 482 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 RGS18Q9NS28 235 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 ASNSD1Q9NWL6 643 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 NME7Q9Y5B8 376 aa17.61■□□□□ 0.41
RAB40C-210ENST00000566290 C2CD4BA6NLJ0 364 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 A8MXQ7 604 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 C9IYK1 514 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 LRCH4O75427 683 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 DESP17661 470 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 GNL1P36915 607 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-210ENST00000566290 LHX1P48742 406 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 LMNB2Q03252 620 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 MTMR3Q13615 1198 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 CYP4A22Q5TCH4 519 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 OLFML1Q6UWY5 402 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 SND1Q7KZF4 910 aaKnown RBP eCLIP17.6■□□□□ 0.41
RAB40C-210ENST00000566290 SLC26A9Q7LBE3 791 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 ZNF598Q86UK7 904 aaKnown RBP17.6■□□□□ 0.41
RAB40C-210ENST00000566290 OR6B3Q8NGW1 331 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 TBCBQ99426 244 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 NFU1Q9UMS0 254 aa17.6■□□□□ 0.41
RAB40C-210ENST00000566290 PTPRZ1P23471 2315 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-210ENST00000566290 ZSCAN5CA6NGD5 496 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-210ENST00000566290 NDC80O14777 642 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 TJP3O95049 919 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 ECEL1O95672 775 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 GAS8O95995 478 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 CYP11A1P05108 521 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 FGFR1P11362 822 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 PSMA2P25787 234 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 PTPN9P43378 593 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 TNNT3P45378 269 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-210ENST00000566290 PTK6Q13882 451 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 TFDP3Q5H9I0 405 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 AADACL2Q6P093 401 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 TTC27Q6P3X3 843 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 ACOT1Q86TX2 421 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 NPAS4Q8IUM7 802 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 CCHCR1Q8TD31 782 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 TEKT4Q8WW24 435 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 KCTD13Q8WZ19 329 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 SH3GL2Q99962 352 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 DCLK3Q9C098 648 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 RSAD1Q9HA92 442 aa17.59■□□□□ 0.41
RAB40C-210ENST00000566290 METTL5Q9NRN9 209 aaKnown RBP17.59■□□□□ 0.41
RAB40C-210ENST00000566290 ZDHHC18Q9NUE0 388 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms