RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 SMARCD1Q96GM5 515 aa11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 FAM84AQ96KN4 292 aa11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 LPIN3Q9BQK8 851 aa11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 XPO4Q9C0E2 1151 aaKnown RBP11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 FBXO44Q9H4M3 255 aa11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 SMYD3Q9H7B4 428 aa11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 KIF9Q9HAQ2 790 aa11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 DMAP1Q9NPF5 467 aaPredicted RBP11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 CRTAC1Q9NQ79 661 aa11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 TRPV5Q9NQA5 729 aa11.32□□□□□ -0.6
NSMCE1-211ENST00000566087 TICRRQ7Z2Z1 1910 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 MAN2B1O00754 1011 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 ADRB1P08588 477 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 USP17L7P0C7H9 530 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 TDGF1P13385 188 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 HMGA1P17096 107 aaKnown RBP11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 FCARP24071 287 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 YWHAQP27348 245 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 RPS9P46781 194 aaKnown RBP11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 FMO5P49326 533 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 MLLT6P55198 1093 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 MARSP56192 900 aaKnown RBP11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 INCA1Q0VD86 236 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 KRT31Q15323 416 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 ARHGAP29Q52LW3 1261 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 PPM1JQ5JR12 505 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 SMYD5Q6GMV2 418 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 CC2D1AQ6P1N0 951 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 SCARA5Q6ZMJ2 495 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 GAREM2Q75VX8 874 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 MON1AQ86VX9 555 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 ARID3BQ8IVW6 561 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 DRC7Q8IY82 874 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 CMTM8Q8IZV2 173 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 TTC9BQ8N6N2 239 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 CSGALNACT1Q8TDX6 532 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 OVCA2Q8WZ82 227 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 DNASE1L2Q92874 299 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 SLC35C1Q96A29 364 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 CYFIP2Q96F07 1278 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 MSANTD3Q96H12 275 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 HEXIM2Q96MH2 286 aaKnown RBP11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 NAP1L5Q96NT1 182 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 COL4A2P08572 1712 aa11.31□□□□□ -0.6
NSMCE1-211ENST00000566087 TSC2P49815 1807 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 TRAV19A0A0A6YYK7 116 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 GOLGA6L6A8MZA4 724 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 F8VP50 259 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 CHADO15335 359 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 MOSPD3O75425 235 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 AP1G2O75843 785 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 AFPP02771 609 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 F11P03951 625 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 FAM200BP0CF97 657 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 GJA1P17302 382 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 CCR2P41597 374 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 ASPAP45381 313 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 COPB1P53618 953 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 DMWDQ09019 674 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 KCNH2Q12809 1159 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 SRSF5Q13243 272 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 NR1I3Q14994 352 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 SCARA3Q6AZY7 606 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 APTXQ7Z2E3 356 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 JAKMIP2Q96AA8 810 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 CNOT6LQ96LI5 555 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 NT5C1BQ96P26 610 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 HNRNPABQ99729 332 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 B3GNT5Q9BYG0 378 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 CHRDQ9H2X0 955 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 LMAN1LQ9HAT1 526 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 TDP1Q9NUW8 608 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 RALYQ9UKM9 306 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 RAB23Q9ULC3 237 aa11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 TPRP12270 2363 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-211ENST00000566087 HEPACAM2A8MVW5 462 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 GDF9O60383 454 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 CILPO75339 1184 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 HDCP19113 662 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 CD58P19256 250 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 GDI1P31150 447 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 HOXC13P31276 330 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 MTIF2P46199 727 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 RAP1GAPP47736 663 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 SATB1Q01826 763 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 NR1H3Q13133 447 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 CUL2Q13617 745 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 ZNF268Q14587 947 aaPredicted RBP11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 SPOPLQ6IQ16 392 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 ENOSF1Q7L5Y1 443 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 TRIM59Q8IWR1 403 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 KIAA1958Q8N8K9 716 aa11.29□□□□□ -0.6
NSMCE1-211ENST00000566087 MAB21L3Q8N8X9 362 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms