RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 ANKRD62A6NC57 917 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 GOLGA8IPA6NC78 632 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 TRIM49BA6NDI0 452 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 GOLGA8JA6NMD2 632 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 PATE3B3GLJ2 98 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 INO80B-WBP1J3KQ70 363 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 K7ERI5 159 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 CLIC2O15247 247 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 C1QL1O75973 258 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 RHOBTB3O94955 611 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 ALDH2P05091 517 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 PLA2G2AP14555 144 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 ARF4P18085 180 aaPredicted RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 EIF4BP23588 611 aaKnown RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 SOX9P48436 509 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 DNM2P50570 870 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 STX17P56962 302 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 GTF2BQ00403 316 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 C19orf57Q0VDD7 668 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 SCAPQ12770 1279 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 KLHL40Q2TBA0 621 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 NOMO2Q5JPE7 1267 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 MEI1Q5TIA1 1274 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 CDCA2Q69YH5 1023 aaPredicted RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 ANKRD40Q6AI12 368 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 PRSS55Q6UWB4 352 aaPredicted RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 RBM43Q6ZSC3 357 aaKnown RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 LONP2Q86WA8 852 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 GAS2L3Q86XJ1 694 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 PROSER1Q86XN7 944 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 MARCH9Q86YJ5 346 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 ELOA2Q8IYF1 753 aaPredicted RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 AGGF1Q8N302 714 aaeCLIP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 GALNT11Q8NCW6 608 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 MCPH1Q8NEM0 835 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 MDM1Q8TC05 714 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 SMARCE1Q969G3 411 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 CCDC43Q96MW1 224 aaKnown RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 RPS6KC1Q96S38 1066 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 ACO2Q99798 780 aaKnown RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 EDEM2Q9BV94 578 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 INO80BQ9C086 356 aaPredicted RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 NUP62CLQ9H1M0 184 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 KCTD10Q9H3F6 313 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 CUEDC2Q9H467 287 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 PCIF1Q9H4Z3 704 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 MRPL44Q9H9J2 332 aaKnown RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 PARVGQ9HBI0 331 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 SRA1Q9HD15 236 aaKnown RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 KMT5AQ9NQR1 393 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 MIOSQ9NXC5 875 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 FOXD3Q9UJU5 478 aaPredicted RBP6.66□□□□□ -1.34
UBFD1-204ENST00000565634 TBX20Q9UMR3 447 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 HES2Q9Y543 173 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 ZMYM2Q9UBW7 1377 aa6.66□□□□□ -1.34
UBFD1-204ENST00000565634 MYO18AQ92614 2054 aaKnown RBP6.65□□□□□ -1.34
UBFD1-204ENST00000565634 GOLGA6L22H0YM25 854 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 ASAP2O43150 1006 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 EXTL3O43909 919 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 TSPAN1O60635 241 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 GCNT3O95395 438 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 CAPNS1P04632 268 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 URODP06132 367 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 CHRNB1P11230 501 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 TMOD1P28289 359 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 MPLP40238 635 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 TNFSF9P41273 254 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 MAGEA9P43362 315 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 NAMPTP43490 491 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 OR1G1P47890 313 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 CASP4P49662 377 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 CCR3P51677 355 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 FAM193AP78312 1265 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 AMPD3Q01432 767 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 PFKPQ01813 784 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 CREB5Q02930 508 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 POU5F1BQ06416 359 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 MXD4Q14582 209 aaPredicted RBP6.65□□□□□ -1.34
UBFD1-204ENST00000565634 DPCR1Q3MIW9 517 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 ZSCAN23Q3MJ62 389 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.65□□□□□ -1.34
UBFD1-204ENST00000565634 FAM26FQ5R3K3 315 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 KLHL10Q6JEL2 608 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 PKN3Q6P5Z2 889 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 CRELD2Q6UXH1 353 aaPredicted RBP6.65□□□□□ -1.34
UBFD1-204ENST00000565634 ADAMTSL4Q6UY14 1074 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 CCDC65Q8IXS2 484 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 CEP120Q8N960 986 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 SMG8Q8ND04 991 aaKnown RBP6.65□□□□□ -1.34
UBFD1-204ENST00000565634 DEPTORQ8TB45 409 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 PLEKHO2Q8TD55 490 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 FBF1Q8TES7 1133 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 TCP11Q8WWU5 503 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 KIFAP3Q92845 792 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 ELMO3Q96BJ8 720 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 SCLT1Q96NL6 688 aa6.65□□□□□ -1.34
UBFD1-204ENST00000565634 FAM193BQ96PV7 902 aaPredicted RBP6.65□□□□□ -1.34
UBFD1-204ENST00000565634 UBL7Q96S82 380 aaPredicted RBP6.65□□□□□ -1.34
UBFD1-204ENST00000565634 CBWD1Q9BRT8 395 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms