RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 VDRP11473 427 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 UBE3AQ05086 875 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 ZNF252P-AS1Q0IIN9 211 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 HLTFQ14527 1009 aaKnown RBP eCLIP13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 CNGA2Q16280 664 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 PTPN20Q4JDL3 420 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 LRRC38Q5VT99 294 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 KIAA1841Q6NSI8 718 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 CCDC137Q6PK04 289 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 ANKS3Q6ZW76 656 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 RNF168Q8IYW5 571 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 IQCKQ8N0W5 287 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 NIPA2Q8N8Q9 360 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 BCL7CQ8WUZ0 217 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 KBTBD7Q8WVZ9 684 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 MAIP1Q8WWC4 291 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 SLCO2A1Q92959 643 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 TNIP3Q96KP6 325 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 SH3GL2Q99962 352 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 MRPL45Q9BRJ2 306 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 TRIM51Q9BSJ1 452 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 NT5C1AQ9BXI3 368 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 NEUROG2Q9H2A3 272 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 SSX2IPQ9Y2D8 614 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 VWA8A3KMH1 1905 aa13.3□□□□□ -0.28
NSMCE1-208ENST00000565070 A8MXQ7 604 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 O00370 1275 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 MYOGP15173 224 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 TKTP29401 623 aaKnown RBP13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 COILP38432 576 aaPredicted RBP13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 ERVK-21P61565 698 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 CREMQ03060 361 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 ORC1Q13415 861 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 DAB2IPQ5VWQ8 1189 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 PPP2R2DQ66LE6 453 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 ZNF280DQ6N043 979 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 CEP57Q86XR8 500 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 KLHL23Q8NBE8 558 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 EXD1Q8NHP7 514 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 MCEEQ96PE7 176 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 SLC28A3Q9HAS3 691 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 DDX43Q9NXZ2 648 aaKnown RBP13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 RASAL2Q9UJF2 1139 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 YBX2Q9Y2T7 364 aaKnown RBP13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 SIGLEC16A6NMB1 481 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 MICAL2O94851 1124 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 URODP06132 367 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 GPD2P43304 727 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 GABRB2P47870 512 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 GLUD2P49448 558 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 NDST1P52848 882 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 OGDHQ02218 1023 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 KLF1Q13351 362 aaPredicted RBP13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 PIGHQ14442 188 aaPredicted RBP13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 VARS2Q5ST30 1063 aaKnown RBP13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 CYP4A22Q5TCH4 519 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 CPXM1Q96SM3 734 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 ACBD6Q9BR61 282 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 CHST7Q9NS84 486 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 WDR35Q9P2L0 1181 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 CDH9Q9ULB4 789 aa13.29□□□□□ -0.28
NSMCE1-208ENST00000565070 OR6C75A6NL08 312 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 HSF2BPO75031 334 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 RNF40O75150 1001 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 DNAJB2P25686 324 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 GBP1P32455 592 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 PBX2P40425 430 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 TSPY1Q01534 308 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 DSG1Q02413 1049 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 MRPL58Q14197 206 aaKnown RBP13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 MAPRE1Q15691 268 aaKnown RBP13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 SGO2Q562F6 1265 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 LCLAT1Q6UWP7 414 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 VPS52Q8N1B4 723 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 FBXO22Q8NEZ5 403 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 FNIP1Q8TF40 1166 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 LRRC45Q96CN5 670 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 HERPUD2Q9BSE4 406 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 C17orf80Q9BSJ5 609 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 DPH5Q9H2P9 285 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 NKX2-4Q9H2Z4 354 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 ZDHHC18Q9NUE0 388 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 VPS18Q9P253 973 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 TIMM13Q9Y5L4 95 aaPredicted RBP13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 PLXNA4Q9HCM2 1894 aa13.28□□□□□ -0.28
NSMCE1-208ENST00000565070 HCRTO43612 131 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 OPA1O60313 960 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 PDCLQ13371 301 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 ZNF268Q14587 947 aaPredicted RBP13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 STILQ15468 1287 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 LRIT3Q3SXY7 679 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 CTXN3Q4LDR2 81 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 XYLT1Q86Y38 959 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 CRYBG2Q8N1P7 616 aa13.27□□□□□ -0.28
NSMCE1-208ENST00000565070 RIN2Q8WYP3 895 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms