RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 DHCR24Q15392 516 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 CEP135Q66GS9 1140 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 PKN3Q6P5Z2 889 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 PRR23CQ6ZRP0 262 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 PAQR9Q6ZVX9 377 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 FILIP1Q7Z7B0 1213 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 FAM35AQ86V20 835 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 GUF1Q8N442 669 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 TTC39CQ8N584 583 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 TTC16Q8NEE8 873 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 RPLP0P6Q8NHW5 317 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 KCNV2Q8TDN2 545 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 DDX1Q92499 740 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 KCNK16Q96T55 309 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 IMPG2Q9BZV3 1241 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 FAM124BQ9H5Z6 455 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 SLC30A4O14863 429 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 AP1G2O75843 785 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 RHOBTB1O94844 696 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 ZNF806P0C7X5 589 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 MBL2P11226 248 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 KRT13P13646 458 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 PSMC2P35998 433 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 OPRD1P41143 372 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 TNFRSF4P43489 277 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 CACNA2D1P54289 1103 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 DLG4P78352 724 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 DPYDQ12882 1025 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 SRSF5Q13243 272 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 ADAM9Q13443 819 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 DMC1Q14565 340 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 KRBA2Q6ZNG9 492 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 NUDT18Q6ZVK8 323 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 ACOT1Q86TX2 421 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 FUKQ8N0W3 1084 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 CCDC150Q8NCX0 1101 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 SCAMP5Q8TAC9 235 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 USP33Q8TEY7 942 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 PNKPQ96T60 521 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 GTPBP4Q9BZE4 634 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 PNPLA8Q9NP80 782 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 TMEM30AQ9NV96 361 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 CFAP97Q9P2B7 532 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 CHORDC1Q9UHD1 332 aaPredicted RBP12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 ATG2BQ96BY7 2078 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 DNAH14Q0VDD8 3507 aa12.91□□□□□ -0.34
GTF3C1-204ENST00000564664 SPAG17Q6Q759 2223 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 SDK1Q7Z5N4 2213 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 RALGAPA1Q6GYQ0 2036 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 K7EQS6 105 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 COCHO43405 550 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 STX10O60499 249 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 EPN2O95208 641 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 HLA-DRAP01903 254 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 APODP05090 189 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 CYP17A1P05093 508 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 NR2F2P24468 414 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 GRIA2P42262 883 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 NDST1P52848 882 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 LIMK1P53667 647 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 SLC5A3P53794 718 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 GAD2Q05329 585 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 INCA1Q0VD86 236 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 EDRF1Q3B7T1 1238 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 USP39Q53GS9 565 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 RHBDF2Q6PJF5 856 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 EZH1Q92800 747 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 HNRNPABQ99729 332 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 NT5C1AQ9BXI3 368 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 SDCBP2Q9H190 292 aa12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 TLR8Q9NR97 1041 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-204ENST00000564664 MED19A0JLT2 244 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 ALDH1A2O94788 518 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 ZNF202O95125 648 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 FAM200BP0CF97 657 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 ADH5P11766 374 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 PIK3CAP42336 1068 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 ASPAP45381 313 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 PXNP49023 591 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 DGKEP52429 567 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 GOLGA8FQ08AF8 430 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 GOLGA8DPQ0D2H9 430 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 IFRD2Q12894 506 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 ELF2Q15723 593 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 GAB4Q2WGN9 574 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 C1orf220Q5T0J3 134 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 BTBD8Q5XKL5 378 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 NAIF1Q69YI7 327 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 KLHDC10Q6PID8 442 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 SCARA5Q6ZMJ2 495 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 TADA2BQ86TJ2 420 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 KBTBD6Q86V97 674 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 FAM186BQ8IYM0 893 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 ZNF276Q8N554 614 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 TSTD1Q8NFU3 115 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 SLC2A14Q8TDB8 520 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 SMOQ99835 787 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 NACA2Q9H009 215 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms