RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 UBXN6Q9BZV1 441 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 PRDM5Q9NQX1 630 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-208ENST00000563220 MTUS1Q9ULD2 1270 aa18.91■□□□□ 0.62
COMMD4-208ENST00000563220 C3orf70A6NLC5 250 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 SYN3O14994 580 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 KRT7P08729 469 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 KRT10P13645 584 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 CSF2RAP15509 400 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 GUCY2DQ02846 1103 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 ADCY2Q08462 1091 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 TRADDQ15628 312 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 PPP2R5EQ16537 467 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 RAB41Q5JT25 222 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 EFHC1Q5JVL4 640 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 VARS2Q5ST30 1063 aaKnown RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 FAM171A1Q5VUB5 890 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 TMCO3Q6UWJ1 677 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 TMEM173Q86WV6 379 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 CCDC26Q8TAB7 109 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 TMEM175Q9BSA9 504 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 C11orf84Q9BUA3 381 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 DDX23Q9BUQ8 820 aaKnown RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 ULBP1Q9BZM6 244 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 EPB41L5Q9HCM4 733 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 GDF3Q9NR23 364 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 ESYT3A0FGR9 886 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 TTI1O43156 1089 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 MCM3P25205 808 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 MRPL58Q14197 206 aaKnown RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 MAPRE1Q15691 268 aaKnown RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 BEND6Q5SZJ8 279 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 SPOCD1Q6ZMY3 1216 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 CEP57Q86XR8 500 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 GSPT2Q8IYD1 628 aaKnown RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 KRT222Q8N1A0 295 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 SIX6OS1Q8N1H7 587 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 FAM172AQ8WUF8 416 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 C1orf54Q8WWF1 131 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 RUBCNQ92622 972 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 B3GALT6Q96L58 329 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 ZCWPW1Q9H0M4 648 aa18.9■□□□□ 0.62
COMMD4-208ENST00000563220 R3HDM2Q9Y2K5 976 aaKnown RBP18.9■□□□□ 0.62
COMMD4-208ENST00000563220 LRRD1A4D1F6 860 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 BHMG1C9JSJ3 638 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-208ENST00000563220 KIAA0355O15063 1070 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 DGKIO75912 1065 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 CHRNA3P32297 505 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 PTPN9P43378 593 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 DMTNQ08495 405 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 KAZNQ674X7 775 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 HFE2Q6ZVN8 426 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 MAATS1Q7Z4T9 603 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 LRRC43Q8N309 656 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 CMASQ8NFW8 434 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-208ENST00000563220 BCL7CQ8WUZ0 217 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-208ENST00000563220 CENPIQ92674 756 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-208ENST00000563220 FAM149B1Q96BN6 582 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 ARFGAP3Q9NP61 516 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 NGRNQ9NPE2 291 aaKnown RBP18.89■□□□□ 0.61
COMMD4-208ENST00000563220 CHST7Q9NS84 486 aa18.89■□□□□ 0.61
COMMD4-208ENST00000563220 HSF2BPO75031 334 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 FGFR3P22607 806 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 KDELR1P24390 212 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 COILP38432 576 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-208ENST00000563220 CDKN2BP42772 138 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 KCNJ1P48048 391 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 HDAC4P56524 1084 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 COPS2P61201 443 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 GABPB1Q06547 395 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-208ENST00000563220 SLC39A12Q504Y0 691 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 FUT10Q6P4F1 479 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 TMCO2Q7Z6W1 182 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-208ENST00000563220 DEFB106AQ8N104 65 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 C12orf50Q8NA57 414 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-208ENST00000563220 MAIP1Q8WWC4 291 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 CASKIN2Q8WXE0 1202 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 TOP1MTQ969P6 601 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 ZMYND15Q9H091 742 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 LRRC19Q9H756 370 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.88■□□□□ 0.61
COMMD4-208ENST00000563220 hCG_1818297A0A087WSY0 165 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 ABHD14A-ACY1A0A1B0GW23 586 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 ERLIN1O75477 346 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 FBXO21O94952 628 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 CD48P09326 243 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 USP17L7P0C7H9 530 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 CYP2F1P24903 491 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 CETN2P41208 172 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 MATKP42679 507 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 PTGIRP43119 386 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 ATXN1P54253 815 aaKnown RBP18.88■□□□□ 0.61
COMMD4-208ENST00000563220 DAOAP59103 153 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 YWHAZP63104 245 aaKnown RBP18.88■□□□□ 0.61
COMMD4-208ENST00000563220 DR1Q01658 176 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 ODF2Q5BJF6 829 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 SCYL2Q6P3W7 929 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 CCDC137Q6PK04 289 aaKnown RBP18.88■□□□□ 0.61
COMMD4-208ENST00000563220 TAS1R1Q7RTX1 841 aa18.88■□□□□ 0.61
COMMD4-208ENST00000563220 SPATA2LQ8IUW3 424 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-208ENST00000563220 IFT20Q8IY31 132 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms