RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 APODP05090 189 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 ACAT1P24752 427 aaKnown RBP8.9□□□□□ -0.98
CKLF-208ENST00000563092 PPP3CCP48454 512 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 LHX1P48742 406 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 NEK4P51957 841 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 ATXN3P54252 364 aaPredicted RBP8.9□□□□□ -0.98
CKLF-208ENST00000563092 USP46P62068 366 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 NOP14P78316 857 aaKnown RBP8.9□□□□□ -0.98
CKLF-208ENST00000563092 HMGN5P82970 282 aaKnown RBP8.9□□□□□ -0.98
CKLF-208ENST00000563092 MYL7Q01449 175 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 RPL6Q02878 288 aaKnown RBP8.9□□□□□ -0.98
CKLF-208ENST00000563092 SOWAHAQ2M3V2 549 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 ARL6IP4Q66PJ3 421 aaKnown RBP8.9□□□□□ -0.98
CKLF-208ENST00000563092 ADALQ6DHV7 355 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 VSTM1Q6UX27 236 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 DBX2Q6ZNG2 339 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 MYCT1Q8N699 235 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 TOP6BLQ8N6T0 577 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 OR2I1PQ8NGU4 316 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 BAHD1Q8TBE0 780 aaPredicted RBP8.9□□□□□ -0.98
CKLF-208ENST00000563092 HMGB4Q8WW32 186 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 GTPBP2Q9BX10 602 aaKnown RBP8.9□□□□□ -0.98
CKLF-208ENST00000563092 SIX4Q9UIU6 781 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 LIMCH1Q9UPQ0 1083 aa8.9□□□□□ -0.98
CKLF-208ENST00000563092 PI4KAP42356 2102 aa8.9□□□□□ -0.99
CKLF-208ENST00000563092 MYH11P35749 1972 aa8.9□□□□□ -0.99
CKLF-208ENST00000563092 A0A087WV48 116 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.89□□□□□ -0.99
CKLF-208ENST00000563092 HOXC11O43248 304 aaPredicted RBP8.89□□□□□ -0.99
CKLF-208ENST00000563092 HUS1O60921 280 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 ADH1CP00326 375 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 ITGB3P05106 788 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 SYPP08247 313 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 ADH5P11766 374 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 PCSK1P29120 753 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 POLR2BP30876 1174 aaKnown RBP8.89□□□□□ -0.99
CKLF-208ENST00000563092 RESTQ13127 1097 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 DENND5BQ6ZUT9 1274 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 TOGARAM2Q6ZUX3 1019 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 DPH6Q7L8W6 267 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 TMPRSS7Q7RTY8 843 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 ZNF720Q7Z2F6 126 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 SLCO6A1Q86UG4 719 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 PACS2Q86VP3 889 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 GPBP1Q86WP2 473 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 MIB1Q86YT6 1006 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 SPATA2LQ8IUW3 424 aaPredicted RBP8.89□□□□□ -0.99
CKLF-208ENST00000563092 NAXDQ8IW45 347 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 CCDC83Q8IWF9 413 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 GLIS3Q8NEA6 775 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 MDM1Q8TC05 714 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 ADAM32Q8TC27 787 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 KBTBD7Q8WVZ9 684 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 HVCN1Q96D96 273 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 C8orf48Q96LL4 319 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 AK8Q96MA6 479 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 PLIN2Q99541 437 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 IKZF4Q9H2S9 585 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 ZDHHC4Q9NPG8 344 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 CRTAC1Q9NQ79 661 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 ARHGEF4Q9NR80 690 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 TOR4AQ9NXH8 423 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 TRPM5Q9NZQ8 1165 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 CALCOCO1Q9P1Z2 691 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 BCCIPQ9P287 314 aaKnown RBP eCLIP8.89□□□□□ -0.99
CKLF-208ENST00000563092 ITGA11Q9UKX5 1188 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 PCOLCE2Q9UKZ9 415 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 AGAP1Q9UPQ3 857 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 RAXQ9Y2V3 346 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 NFE2L3Q9Y4A8 694 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 MAST4O15021 2626 aa8.89□□□□□ -0.99
CKLF-208ENST00000563092 ACACAQ13085 2346 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 GON4LQ3T8J9 2241 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 TENM4Q6N022 2769 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 E2F8A0AVK6 867 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 ATP2C2O75185 946 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 ZNF217O75362 1048 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 FAM13AO94988 1023 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 ZNF883P0CG24 379 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 LMO2P25791 158 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 GNL2Q13823 731 aaKnown RBP8.88□□□□□ -0.99
CKLF-208ENST00000563092 POSTNQ15063 836 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 ZRSR1Q15695 479 aaKnown RBP8.88□□□□□ -0.99
CKLF-208ENST00000563092 RILPL1Q5EBL4 403 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 LY6G5CQ5SRR4 150 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 SNX30Q5VWJ9 437 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 C4orf50Q6ZRC1 276 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 TRMT11Q7Z4G4 463 aaKnown RBP8.88□□□□□ -0.99
CKLF-208ENST00000563092 TTC30AQ86WT1 665 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 DDX42Q86XP3 938 aaKnown RBP eCLIP8.88□□□□□ -0.99
CKLF-208ENST00000563092 BRSK2Q8IWQ3 736 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 SCN4BQ8IWT1 228 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 ADGRF2Q8IZF7 708 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 PNPLA1Q8N8W4 532 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 TERB1Q8NA31 727 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 ZSWIM2Q8NEG5 633 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 DNASE2BQ8WZ79 361 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 OTUB2Q96DC9 234 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 GABRG3Q99928 467 aa8.88□□□□□ -0.99
CKLF-208ENST00000563092 ZDHHC5Q9C0B5 715 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms