RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 SCML4Q8N228 414 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 ARHGAP18Q8N392 663 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 WDTC1Q8N5D0 677 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 SLC4A5Q9BY07 1137 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 SLITRK6Q9H5Y7 841 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 CNGB3Q9NQW8 809 aa17.23■□□□□ 0.35
USB1-204ENST00000561568 BZW2Q9Y6E2 419 aaKnown RBP17.23■□□□□ 0.35
USB1-204ENST00000561568 FBXO21O94952 628 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 LSM8O95777 96 aaKnown RBP17.22■□□□□ 0.35
USB1-204ENST00000561568 ABL1P00519 1130 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 MMEP08473 750 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 CFHP08603 1231 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 ZDHHC11BP0C7U3 371 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 ASIC2Q16515 512 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 TSR1Q2NL82 804 aaKnown RBP17.22■□□□□ 0.35
USB1-204ENST00000561568 TAF3Q5VWG9 929 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 TRIM72Q6ZMU5 477 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 MTSS1LQ765P7 747 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 MAB21L3Q8N8X9 362 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 MRFAP1L1Q96HT8 127 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 SLC46A2Q9BY10 475 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 ST7Q9NRC1 585 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 LIMD1Q9UGP4 676 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 NOCTQ9UK39 431 aaKnown RBP17.22■□□□□ 0.35
USB1-204ENST00000561568 MYH10P35580 1976 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 EYSQ5T1H1 3165 aa17.22■□□□□ 0.35
USB1-204ENST00000561568 DOCK6Q96HP0 2047 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 NOTCH4Q99466 2003 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 GYPCP04921 128 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 USP17L7P0C7H9 530 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 LCP1P13796 627 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 HDCP19113 662 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 SP100P23497 879 aaPredicted RBP17.21■□□□□ 0.35
USB1-204ENST00000561568 CASP14P31944 242 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 CDH5P33151 784 aaPredicted RBP17.21■□□□□ 0.35
USB1-204ENST00000561568 AVPR1AP37288 418 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 PRKCIP41743 596 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 RGS7P49802 495 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 ZNF75DP51815 510 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 CYP4F8P98187 520 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 TXNDC8Q6A555 127 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 PASD1Q8IV76 773 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 CMTM8Q8IZV2 173 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 GJD3Q8N144 294 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 ZNF276Q8N554 614 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 IRGQQ8WZA9 623 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 SMARCD2Q92925 531 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 PPP1R13BQ96KQ4 1090 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 ZSWIM3Q96MP5 696 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 AGPAT1Q99943 283 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 MIS12Q9H081 205 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 TRPV4Q9HBA0 871 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 CLIC5Q9NZA1 410 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 IGSF9Q9P2J2 1179 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 PRUNE2Q8WUY3 3088 aa17.21■□□□□ 0.35
USB1-204ENST00000561568 TRAV19A0A0A6YYK7 116 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 SART1O43290 800 aaKnown RBP17.2■□□□□ 0.34
USB1-204ENST00000561568 TADA3O75528 432 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 RALAP11233 206 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 CHRNB2P17787 502 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 TNFAIP3P21580 790 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 TUBP50607 506 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 KLHL30Q0D2K2 578 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 ADIGQ0VDE8 80 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 PDCLQ13371 301 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 FAM78AQ5JUQ0 283 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 HECTD3Q5T447 861 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 TADA2BQ86TJ2 420 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 ARID3BQ8IVW6 561 aaPredicted RBP17.2■□□□□ 0.34
USB1-204ENST00000561568 SCUBE3Q8IX30 993 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 MSANTD4Q8NCY6 345 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 OR8K1Q8NGG5 319 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 ZSCAN18Q8TBC5 510 aaPredicted RBP17.2■□□□□ 0.34
USB1-204ENST00000561568 ADAMTS19Q8TE59 1207 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 SLC20A1Q8WUM9 679 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 ASB16Q96NS5 453 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 CDK5RAP1Q96SZ6 601 aaKnown RBP17.2■□□□□ 0.34
USB1-204ENST00000561568 ULBP1Q9BZM6 244 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 ZFP14Q9HCL3 533 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 GMIPQ9P107 970 aa17.2■□□□□ 0.34
USB1-204ENST00000561568 ANHXE9PGG2 379 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 NRG2O14511 850 aaPredicted RBP17.19■□□□□ 0.34
USB1-204ENST00000561568 GABBR2O75899 941 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 CYP1A1P04798 512 aaPredicted RBP17.19■□□□□ 0.34
USB1-204ENST00000561568 FMO1Q01740 532 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 STXBP5Q5T5C0 1151 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 POTEHQ6S545 545 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 ERICH1Q86X53 443 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 GOLGA1Q92805 767 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 CYP2S1Q96SQ9 504 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 HAUS4Q9H6D7 363 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 SYNCQ9H7C4 482 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 TRPC7Q9HCX4 862 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 ZNHIT6Q9NWK9 470 aaKnown RBP17.19■□□□□ 0.34
USB1-204ENST00000561568 CYTH4Q9UIA0 394 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 NAGPAQ9UK23 515 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 GREB1Q4ZG55 1949 aa17.19■□□□□ 0.34
USB1-204ENST00000561568 A0A1W2PQH9 124 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms