RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SMARCB1Q12824 385 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 GPR17Q13304 367 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 RAPGEF1Q13905 1077 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 STILQ15468 1287 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 ARHGAP44Q17R89 818 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 RTP2Q5QGT7 225 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 FAM171A1Q5VUB5 890 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 OVOS1Q6IE37 1185 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 TMEM270Q6UE05 265 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 RSPO2Q6UXX9 243 aaPredicted RBP5.81□□□□□ -1.48
ZEB1-220ENST00000560909 DSTYKQ6XUX3 929 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 PAQR9Q6ZVX9 377 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 ANKS3Q6ZW76 656 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 CACNA2D4Q7Z3S7 1137 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 ZNF571Q7Z3V5 609 aaPredicted RBP5.81□□□□□ -1.48
ZEB1-220ENST00000560909 NOP9Q86U38 636 aaKnown RBP5.81□□□□□ -1.48
ZEB1-220ENST00000560909 LRRTM3Q86VH5 581 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 SLC47A2Q86VL8 602 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 TMTC1Q8IUR5 882 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 CCDC170Q8IYT3 715 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 KLHL23Q8NBE8 558 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 SPC24Q8NBT2 197 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 RBBP8NLQ8NC74 664 aaPredicted RBP5.81□□□□□ -1.48
ZEB1-220ENST00000560909 OR10T2Q8NGX3 314 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 MYCBPAPQ8TBZ2 947 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 STK32AQ8WU08 396 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 CPLX3Q8WVH0 158 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 ZNF606Q8WXB4 792 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 TFAP2BQ92481 460 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 TNIP3Q96KP6 325 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 TGS1Q96RS0 853 aaKnown RBP5.81□□□□□ -1.48
ZEB1-220ENST00000560909 MMS19Q96T76 1030 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 CHP1Q99653 195 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 PBX4Q9BYU1 374 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 UBXN6Q9BZV1 441 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 ZCWPW1Q9H0M4 648 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 ZBP1Q9H171 429 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 LHX5Q9H2C1 402 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 ABCB6Q9NP58 842 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 CRTAC1Q9NQ79 661 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.81□□□□□ -1.482e-6■■■■■ 96.1
ZEB1-220ENST00000560909 HSFX1Q9UBD0 423 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 MTRRQ9UBK8 725 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 HMGXB4Q9UGU5 601 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 MAFFQ9ULX9 164 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 PCDHB4Q9Y5E5 795 aa5.81□□□□□ -1.48
ZEB1-220ENST00000560909 ATP8B3O60423 1300 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 TMEM265A0A087WTH1 108 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 MYBPHLA2RUH7 354 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 A8MXQ7 604 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 GOLGA6L6A8MZA4 724 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 H7C4K7 107 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 DDX3XO00571 662 aaKnown RBP eCLIP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 HCRTO43612 131 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 ABLIM3O94929 683 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 VNN2O95498 520 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 LSM8O95777 96 aaKnown RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 CA3P07451 260 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 PNMA6AP0CW24 399 aaPredicted RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 UNGP13051 313 aaPredicted RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 CD58P19256 250 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 POU3F3P20264 500 aaPredicted RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 IBSPP21815 317 aaPredicted RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 DNAJB1P25685 340 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 SOX11P35716 441 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 GPD2P43304 727 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 MAGEA11P43364 429 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 FMO1Q01740 532 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 CREMQ03060 361 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 KRT17Q04695 432 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 GOLGA8FQ08AF8 430 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 GOLGA8DPQ0D2H9 430 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 KLHL30Q0D2K2 578 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 RAB33AQ14088 237 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 BMS1Q14692 1282 aaKnown RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 TCEAL1Q15170 157 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 PTPN14Q15678 1187 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 MAPRE1Q15691 268 aaKnown RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 ASIC2Q16515 512 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 CFAP221Q4G0U5 840 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 PDE12Q6L8Q7 609 aaKnown RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 CYP26C1Q6V0L0 522 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 SCARA5Q6ZMJ2 495 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 TRIM72Q6ZMU5 477 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 ZNF662Q6ZS27 426 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 RTL10Q7L3V2 364 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 SPRED2Q7Z698 418 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 METTL23Q86XA0 190 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 FUKQ8N0W3 1084 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 VPS52Q8N1B4 723 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 THEM5Q8N1Q8 247 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 WDTC1Q8N5D0 677 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 MRPL43Q8N983 215 aaKnown RBP5.8□□□□□ -1.48
ZEB1-220ENST00000560909 ANKRD52Q8NB46 1076 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 B3GALNT2Q8NCR0 500 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 CCDC112Q8NEF3 446 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 OR6B3Q8NGW1 331 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 HASPINQ8TF76 798 aa5.8□□□□□ -1.48
ZEB1-220ENST00000560909 C2orf15Q8WU43 125 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms