RNA–Protein interactions for RNA: ENST00000560502.5

LDLR-213, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-213ENST00000560502 MYRFLQ96LU7 910 aa14.91□□□□□ -0.02
LDLR-213ENST00000560502 ACBD6Q9BR61 282 aa14.91□□□□□ -0.02
LDLR-213ENST00000560502 PI4K2AQ9BTU6 479 aa14.91□□□□□ -0.02
LDLR-213ENST00000560502 NAA15Q9BXJ9 866 aaKnown RBP14.91□□□□□ -0.02
LDLR-213ENST00000560502 EDEM3Q9BZQ6 932 aa14.91□□□□□ -0.02
LDLR-213ENST00000560502 KCNF1Q9H3M0 494 aa14.91□□□□□ -0.02
LDLR-213ENST00000560502 FBRSL1Q9HCM7 1045 aaKnown RBP14.91□□□□□ -0.02
LDLR-213ENST00000560502 DAAM1Q9Y4D1 1078 aa14.91□□□□□ -0.02
LDLR-213ENST00000560502 A0A1W2PQJ5 194 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 GTPBP10A4D1E9 387 aaKnown RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 PES1O00541 588 aaKnown RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 TM4SF5O14894 197 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 ZNF500O60304 480 aaPredicted RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 MFAP3LO75121 409 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 ATG13O75143 517 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 RNF40O75150 1001 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 ZNF806P0C7X5 589 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 GARTP22102 1010 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 PXNP49023 591 aaPredicted RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 MCCD1P59942 119 aaPredicted RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 USP4Q13107 963 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 SF3A2Q15428 464 aaKnown RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 INTS6LQ5JSJ4 861 aaKnown RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 PLA2G2CQ5R387 149 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 SDHAF4Q5VUM1 108 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 NAIF1Q69YI7 327 aaPredicted RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 KBTBD6Q86V97 674 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 OSTM1Q86WC4 334 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 FAM186BQ8IYM0 893 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 LRRC52Q8N7C0 313 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 SPATA18Q8TC71 538 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 DDX1Q92499 740 aaKnown RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 EZH1Q92800 747 aaPredicted RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 ZC3H10Q96K80 434 aaKnown RBP14.9□□□□□ -0.02
LDLR-213ENST00000560502 FAM213AQ9BRX8 229 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 ARRDC1-AS1Q9H2J1 176 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 KIAA1586Q9HCI6 787 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 NUP205Q92621 2012 aa14.9□□□□□ -0.02
LDLR-213ENST00000560502 AXIN1O15169 862 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 ITGB3P05106 788 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 DRD1P21728 446 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 FECHP22830 423 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 ACAT1P24752 427 aaKnown RBP14.89□□□□□ -0.03
LDLR-213ENST00000560502 CYP2F1P24903 491 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 GJA4P35212 333 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 RPL10AP62906 217 aaKnown RBP14.89□□□□□ -0.03
LDLR-213ENST00000560502 TFAMQ00059 246 aaKnown RBP14.89□□□□□ -0.03
LDLR-213ENST00000560502 ARID5BQ14865 1188 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 MTF1Q14872 753 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 ZNF77Q15935 545 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 DDR2Q16832 855 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 CCDC142Q17RM4 750 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 CEP135Q66GS9 1140 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 INTS8Q75QN2 995 aaKnown RBP14.89□□□□□ -0.03
LDLR-213ENST00000560502 TMEM86AQ8N2M4 240 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 CAMKK1Q8N5S9 505 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 XXYLT1Q8NBI6 393 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 SAAL1Q96ER3 474 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 FAM84AQ96KN4 292 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 RXFP3Q9NSD7 469 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 POLR3BQ9NW08 1133 aaPredicted RBP14.89□□□□□ -0.03
LDLR-213ENST00000560502 GDAP2Q9NXN4 497 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 DDX43Q9NXZ2 648 aaKnown RBP14.89□□□□□ -0.03
LDLR-213ENST00000560502 UXTQ9UBK9 157 aaPredicted RBP14.89□□□□□ -0.03
LDLR-213ENST00000560502 MAGED2Q9UNF1 606 aaPredicted RBP14.89□□□□□ -0.03
LDLR-213ENST00000560502 AGAP1Q9UPQ3 857 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 SLC8A2Q9UPR5 921 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 PCDHGA5Q9Y5G8 931 aa14.89□□□□□ -0.03
LDLR-213ENST00000560502 GABRDO14764 452 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 STX10O60499 249 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 EXOC3O60645 756 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 AFPP02771 609 aaKnown RBP14.88□□□□□ -0.03
LDLR-213ENST00000560502 GYPCP04921 128 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 SKILP12757 684 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 KRT13P13646 458 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 GALK1P51570 392 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 CCZ1BP86790 482 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 CCZ1P86791 482 aaPredicted RBP14.88□□□□□ -0.03
LDLR-213ENST00000560502 AMPD2Q01433 879 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 MYL7Q01449 175 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 SYCP1Q15431 976 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 CCDC6Q16204 474 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 CFAP221Q4G0U5 840 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 AASDHQ4L235 1098 aaPredicted RBP14.88□□□□□ -0.03
LDLR-213ENST00000560502 CC2D1AQ6P1N0 951 aaPredicted RBP14.88□□□□□ -0.03
LDLR-213ENST00000560502 TC2NQ8N9U0 490 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 ZNF397Q8NF99 534 aaPredicted RBP14.88□□□□□ -0.03
LDLR-213ENST00000560502 OSCP1Q8WVF1 389 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 EEF2KMTQ96G04 330 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 SLC22A12Q96S37 553 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 P2RY13Q9BPV8 354 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 ECT2Q9H8V3 914 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 KCND1Q9NSA2 647 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 RBAKQ9NYW8 714 aaPredicted RBP14.88□□□□□ -0.03
LDLR-213ENST00000560502 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.88□□□□□ -0.03
LDLR-213ENST00000560502 GCNT4Q9P109 453 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 SIX4Q9UIU6 781 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 ITGA11Q9UKX5 1188 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 CAPN11Q9UMQ6 739 aa14.88□□□□□ -0.03
LDLR-213ENST00000560502 SIK3Q9Y2K2 1263 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms