RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 POLNQ7Z5Q5 900 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 SERINC5Q86VE9 423 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 NME8Q8N427 588 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 PPP1R10Q96QC0 940 aaKnown RBP14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 CNPY3Q9BT09 278 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 EPN3Q9H201 632 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 ASNSD1Q9NWL6 643 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 ARL5CA6NH57 179 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 PRPSAP2O60256 369 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 NDUFV1P49821 464 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 SEC24CP53992 1094 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 VCPP55072 806 aaKnown RBP14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 PITX1P78337 314 aaPredicted RBP14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 PCBP1Q15365 356 aaKnown RBP eCLIP14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 OASLQ15646 514 aaKnown RBP14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 B3GALNT2Q8NCR0 500 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 MDM1Q8TC05 714 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 FAM149B1Q96BN6 582 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 RHOBTB2Q9BYZ6 727 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 ADAM7Q9H2U9 754 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 PADI3Q9ULW8 664 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 HMGB1P1B2RPK0 211 aaPredicted RBP14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 PIAS1O75925 651 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 ITIH2P19823 946 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 SDC4P31431 198 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 SLC6A3Q01959 620 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 SV2CQ496J9 727 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 XKR4Q5GH76 650 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 MDH1BQ5I0G3 518 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 AGMOQ6ZNB7 445 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 ALLCQ8N6M5 410 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 CCDC89Q8N998 374 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 TRAIPQ9BWF2 469 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 SLC4A5Q9BY07 1137 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 TMPRSS4Q9NRS4 437 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 KIAA1257Q9ULG3 409 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 NOD1Q9Y239 953 aa14.74□□□□□ -0.05
CARMIL3-203ENST00000560349 RARGP13631 454 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 MDH1P40925 334 aaKnown RBP14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 GSCP56915 257 aaPredicted RBP14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 ADIGQ0VDE8 80 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 UNC45BQ8IWX7 931 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 FAM71DQ8N9W8 422 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 CD99L2Q8TCZ2 262 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 HOMER3Q9NSC5 361 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 HEY1Q9Y5J3 304 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 GTF2A1P52655 376 aaPredicted RBP14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 HDAC4P56524 1084 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 ADCY1Q08828 1119 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 BST2Q10589 180 aaKnown RBP14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 TMEM110Q86TL2 294 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 RSPH3Q86UC2 560 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 PIGZQ86VD9 579 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 UNC93AQ86WB7 457 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 FUKQ8N0W3 1084 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 MRRFQ96E11 262 aaKnown RBP14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 MED10Q9BTT4 135 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 GDAP2Q9NXN4 497 aa14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.73□□□□□ -0.05
CARMIL3-203ENST00000560349 PDCD11Q14690 1871 aaKnown RBP14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 KIF3CO14782 793 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 XPOTO43592 962 aaKnown RBP14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 CACNA2D1P54289 1103 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 BCAT1P54687 386 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 SF3A3Q12874 501 aaKnown RBP eCLIP14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 DPYSL3Q14195 570 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 KRT81Q14533 505 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 ANKRD52Q8NB46 1076 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 SPATA18Q8TC71 538 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 SENP8Q96LD8 212 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 SNRNP25Q9BV90 132 aaKnown RBP14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 TMEM30AQ9NV96 361 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 TBK1Q9UHD2 729 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 NR2E3Q9Y5X4 410 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 THP07101 528 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 NUDT17P0C025 328 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 YY1P25490 414 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 GBP1P32455 592 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 COPS2P61201 443 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 SP3Q02447 781 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 SLMAPQ14BN4 828 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 ANKRD22Q5VYY1 191 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 BBS12Q6ZW61 710 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 TTC39CQ8N584 583 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 CMASQ8NFW8 434 aaPredicted RBP14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 SLC35B2Q8TB61 432 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 ZNF473Q8WTR7 871 aaKnown RBP14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 RBM15Q96T37 977 aaKnown RBP eCLIP14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 KCNK16Q96T55 309 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 DDX43Q9NXZ2 648 aaKnown RBP14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 NINJ2Q9NZG7 142 aa14.72□□□□□ -0.05
CARMIL3-203ENST00000560349 MAP3K7CLP57077 242 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 EIF3EP60228 445 aaKnown RBP14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 HTRA3P83110 453 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 STILQ15468 1287 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 FBXW10Q5XX13 1052 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 ICE2Q659A1 982 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 FAM131BQ86XD5 332 aa14.71□□□□□ -0.05
CARMIL3-203ENST00000560349 CRYBG2Q8N1P7 616 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms