RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 C5orf34Q96MH7 638 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 PRR25Q96S07 402 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 SH2D3AQ9BRG2 576 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 C17orf80Q9BSJ5 609 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 PRSS22Q9GZN4 317 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 GBA2Q9HCG7 927 aaPredicted RBP4.53□□□□□ -1.68
SPG11-218ENST00000559754 TPCN1Q9ULQ1 816 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 CDY1Q9Y6F8 540 aa4.53□□□□□ -1.68
SPG11-218ENST00000559754 WDR17Q8IZU2 1322 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 LOC102723971A0A1B0GUV8 181 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 HMGB1P1B2RPK0 211 aaPredicted RBP4.52□□□□□ -1.69
SPG11-218ENST00000559754 CES2O00748 559 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 TBX3O15119 743 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 RGS10O43665 173 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 PMPCBO75439 489 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 BMP15O95972 392 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 FGAP02671 866 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 MYL1P05976 194 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 BRAFP15056 766 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 KLRC1P26715 233 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 PLCD1P51178 756 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 CNN3Q15417 329 aaKnown RBP4.52□□□□□ -1.69
SPG11-218ENST00000559754 ETFDHQ16134 617 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 FAM102BQ5T8I3 360 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 SAMD3Q8N6K7 520 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 SMCR8Q8TEV9 937 aaPredicted RBP4.52□□□□□ -1.69
SPG11-218ENST00000559754 NMD3Q96D46 503 aaKnown RBP4.52□□□□□ -1.69
SPG11-218ENST00000559754 FCRL4Q96PJ5 515 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 FAM118BQ9BPY3 351 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 C22orf23Q9BZE7 217 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 TRIM5Q9C035 493 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 ZNF700Q9H0M5 742 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 TRIM36Q9NQ86 728 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 TUBA8Q9NY65 449 aaPredicted RBP4.52□□□□□ -1.69
SPG11-218ENST00000559754 L1RE1Q9UN81 338 aa4.52□□□□□ -1.69
SPG11-218ENST00000559754 DRG1Q9Y295 367 aaKnown RBP4.52□□□□□ -1.69
SPG11-218ENST00000559754 SMIM35A0A1B0GVV1 85 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 CFAP69A5D8W1 941 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 TRIM43BA6NCK2 446 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 PYCARD-AS1I3L0S3 204 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 TP73O15350 636 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 SRGAP2O75044 1071 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 MOSPD3O75425 235 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 GCATO75600 419 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 RASSF9O75901 435 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 RASAL1O95294 804 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 MYBP10242 640 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 FPR3P25089 353 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 SUMO3P55854 103 aaPredicted RBP4.51□□□□□ -1.69
SPG11-218ENST00000559754 KLF9Q13886 244 aaPredicted RBP4.51□□□□□ -1.69
SPG11-218ENST00000559754 DAZAP2Q15038 168 aaPredicted RBP4.51□□□□□ -1.69
SPG11-218ENST00000559754 FAM187BQ17R55 369 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 PTCHD3Q3KNS1 767 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 RNASE12Q5GAN4 147 aaKnown RBP4.51□□□□□ -1.69
SPG11-218ENST00000559754 CACHD1Q5VU97 1274 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 NXNQ6DKJ4 435 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 ZNF813Q6ZN06 617 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 DPY19L3Q6ZPD9 716 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 PTCHD4Q6ZW05 846 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 CNGA4Q8IV77 575 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 TCEAL8Q8IYN2 117 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 MYO1HQ8N1T3 1032 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
SPG11-218ENST00000559754 PRSS3P2Q8NHM4 247 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 DNAJB14Q8TBM8 379 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 MAML1Q92585 1016 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 TRIM43Q96BQ3 446 aaPredicted RBP4.51□□□□□ -1.69
SPG11-218ENST00000559754 SLC39A13Q96H72 371 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 CCDC17Q96LX7 622 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 MMS19Q96T76 1030 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 VN1R3Q9BXE9 311 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 ARNT2Q9HBZ2 717 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 SNX15Q9NRS6 342 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 SACM1LQ9NTJ5 587 aa4.51□□□□□ -1.69
SPG11-218ENST00000559754 RGS17Q9UGC6 210 aaPredicted RBP4.51□□□□□ -1.69
SPG11-218ENST00000559754 AFF4Q9UHB7 1163 aaKnown RBP4.51□□□□□ -1.69
SPG11-218ENST00000559754 NOB1Q9ULX3 412 aaKnown RBP4.51□□□□□ -1.69
SPG11-218ENST00000559754 USP19O94966 1318 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 ZNF521Q96K83 1311 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 KCNU1A8MYU2 1149 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 TMEM233B4DJY2 109 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 TMEM232C9JQI7 657 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 PPEF2O14830 753 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 DSCR3O14972 297 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 VNN1O95497 513 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 SCGB1D2O95969 90 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 CYP2A6P11509 494 aaPredicted RBP4.5□□□□□ -1.69
SPG11-218ENST00000559754 ALDH5A1P51649 535 aaPredicted RBP4.5□□□□□ -1.69
SPG11-218ENST00000559754 ARHGEF7Q14155 803 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 RALBP1Q15311 655 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 LRRC41Q15345 812 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 TRIP6Q15654 476 aaKnown RBP4.5□□□□□ -1.69
SPG11-218ENST00000559754 CNGA2Q16280 664 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 ARHGAP29Q52LW3 1261 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 PXDC1Q5TGL8 231 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 SLC2A7Q6PXP3 512 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 BCDIN3DQ7Z5W3 292 aaKnown RBP4.5□□□□□ -1.69
SPG11-218ENST00000559754 MICU3Q86XE3 530 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 MAGEB6Q8N7X4 407 aa4.5□□□□□ -1.69
SPG11-218ENST00000559754 NGDNQ8NEJ9 315 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms