RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 OVCA2Q8WZ82 227 aa13.93□□□□□ -0.18
TPM1-220ENST00000559556 DHX58Q96C10 678 aa13.93□□□□□ -0.18
TPM1-220ENST00000559556 ZFRQ96KR1 1074 aaKnown RBP13.93□□□□□ -0.18
TPM1-220ENST00000559556 C7orf25Q9BPX7 421 aa13.93□□□□□ -0.18
TPM1-220ENST00000559556 VRTNQ9H8Y1 702 aa13.93□□□□□ -0.18
TPM1-220ENST00000559556 MAGEF1Q9HAY2 307 aa13.93□□□□□ -0.18
TPM1-220ENST00000559556 SMPD4Q9NXE4 827 aa13.93□□□□□ -0.18
TPM1-220ENST00000559556 CFAP97Q9P2B7 532 aa13.93□□□□□ -0.18
TPM1-220ENST00000559556 CGNQ9P2M7 1197 aaKnown RBP13.93□□□□□ -0.18
TPM1-220ENST00000559556 MUC22E2RYF6 1773 aaPredicted RBP13.92□□□□□ -0.18
TPM1-220ENST00000559556 A0A0A0MRY4 1105 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 E2F8A0AVK6 867 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 CLDN5O00501 218 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 CLIC2O15247 247 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 CUTAO60888 179 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 YEATS4O95619 227 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 ADH1CP00326 375 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 APODP05090 189 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 ADH5P11766 374 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 HNRNPLP14866 589 aaKnown RBP eCLIP13.92□□□□□ -0.184e-7■■□□□ 13.3
TPM1-220ENST00000559556 ATICP31939 592 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 MYL6P60660 151 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 RHBDF2Q6PJF5 856 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 SHC4Q6S5L8 630 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 UNC13DQ70J99 1090 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 CYP2U1Q7Z449 544 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 C12orf40Q86WS4 652 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 NUP93Q8N1F7 819 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 PHTF2Q8N3S3 785 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 CCDC33Q8N5R6 958 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 ALLCQ8N6M5 410 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 IQUBQ8NA54 791 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 IL17RCQ8NAC3 791 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 ZNF516Q92618 1163 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
TPM1-220ENST00000559556 CCDC127Q96BQ5 260 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 OTUB2Q96DC9 234 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 PNKPQ96T60 521 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 DUSP9Q99956 384 aaKnown RBP13.92□□□□□ -0.18
TPM1-220ENST00000559556 B3GNT5Q9BYG0 378 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 TBC1D14Q9P2M4 693 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 INVSQ9Y283 1065 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 IGSF10Q6WRI0 2623 aa13.92□□□□□ -0.18
TPM1-220ENST00000559556 ATP8B3O60423 1300 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 APC2O95996 2303 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 C4orf47A7E2U8 309 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 A8MXQ7 604 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 SGK1O00141 431 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 SCAMP3O14828 347 aaKnown RBP13.91□□□□□ -0.18
TPM1-220ENST00000559556 ALDH1A2O94788 518 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 KAT7O95251 611 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 ABL1P00519 1130 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 MBL2P11226 248 aaPredicted RBP13.91□□□□□ -0.18
TPM1-220ENST00000559556 YWHAQP27348 245 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 P2RY2P41231 377 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 KIR2DL1P43626 348 aaPredicted RBP13.91□□□□□ -0.18
TPM1-220ENST00000559556 SLC6A11P48066 632 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 TUBP50607 506 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 TRPC3Q13507 836 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 SNX30Q5VWJ9 437 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 FAM35AQ86V20 835 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 FBXO32Q969P5 355 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 TMEM9BQ9NQ34 198 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 IL37Q9NZH6 218 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 NXF1Q9UBU9 619 aaKnown RBP13.91□□□□□ -0.18
TPM1-220ENST00000559556 EVLQ9UI08 416 aaPredicted RBP13.91□□□□□ -0.18
TPM1-220ENST00000559556 KNTC1P50748 2209 aa13.91□□□□□ -0.18
TPM1-220ENST00000559556 FAM92AA1XBS5 289 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 PATE3B3GLJ2 98 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 K7ELQ4 463 aaPredicted RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 TNFRSF10BO14763 440 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 KHNYNO15037 678 aaKnown RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 COCHO43405 550 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 KLF8O95600 359 aaPredicted RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 TIE1P35590 1138 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 GRIA2P42262 883 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 TNFRSF4P43489 277 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 NOVA1P51513 510 aaKnown RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 CLDN10P78369 228 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 KDSRQ06136 332 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 IFRD2Q12894 506 aaPredicted RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 ZNF699Q32M78 642 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 LY6G5CQ5SRR4 150 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 DAB2IPQ5VWQ8 1189 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 ETFBKMTQ8IXQ9 262 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 TXNDC5Q8NBS9 432 aaKnown RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 PLEKHO2Q8TD55 490 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 WHAMMQ8TF30 809 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 SMARCD1Q96GM5 515 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 SPACA7Q96KW9 195 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 ZNF396Q96N95 335 aaPredicted RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 SMYD3Q9H7B4 428 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 POLMQ9NP87 494 aaPredicted RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 DMAP1Q9NPF5 467 aaPredicted RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 ARHGEF4Q9NR80 690 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 TFIP11Q9UBB9 837 aaKnown RBP13.9□□□□□ -0.18
TPM1-220ENST00000559556 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
TPM1-220ENST00000559556 DOCK9Q9BZ29 2069 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms