RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 UBXN6Q9BZV1 441 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 XPO4Q9C0E2 1151 aaKnown RBP12.07□□□□□ -0.48
SNX1-204ENST00000559061 TASP1Q9H6P5 420 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 IFNKQ9P0W0 207 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 SCML2Q9UQR0 700 aa12.07□□□□□ -0.48
SNX1-204ENST00000559061 ZFP37Q9Y6Q3 630 aaPredicted RBP12.07□□□□□ -0.48
SNX1-204ENST00000559061 SHISA7A6NL88 538 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 ARNTLO00327 626 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 PIK3R2O00459 728 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 THAP12O43422 761 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 GFPT2O94808 682 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 RTN3O95197 1032 aaPredicted RBP12.06□□□□□ -0.48
SNX1-204ENST00000559061 FGF19O95750 216 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 CYP11B1P15538 503 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 WEE1P30291 646 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 SOX5P35711 763 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 USP8P40818 1118 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 RGS7P49802 495 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 ADIGQ0VDE8 80 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 MEA1Q16626 185 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 HFE2Q6ZVN8 426 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 CCDC186Q7Z3E2 898 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 PASD1Q8IV76 773 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 ARID3BQ8IVW6 561 aaPredicted RBP12.06□□□□□ -0.48
SNX1-204ENST00000559061 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 SLC44A3Q8N4M1 653 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 MAB21L3Q8N8X9 362 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 ANKRD20A12PQ8NF67 263 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 KCTD13Q8WZ19 329 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 SMARCD2Q92925 531 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 FBXO32Q969P5 355 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 WBP2Q969T9 261 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 ACSF2Q96CM8 615 aaPredicted RBP12.06□□□□□ -0.48
SNX1-204ENST00000559061 ASIC4Q96FT7 647 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 PIWIL1Q96J94 861 aaKnown RBP12.06□□□□□ -0.48
SNX1-204ENST00000559061 ULBP1Q9BZM6 244 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 CCSER2Q9H7U1 834 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 C11orf16Q9NQ32 467 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 COMMD8Q9NX08 183 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 UXTQ9UBK9 157 aaPredicted RBP12.06□□□□□ -0.48
SNX1-204ENST00000559061 CHORDC1Q9UHD1 332 aaPredicted RBP12.06□□□□□ -0.48
SNX1-204ENST00000559061 PCDHGC3Q9UN70 934 aa12.06□□□□□ -0.48
SNX1-204ENST00000559061 A0A1W2PQH9 124 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 FAM170AA1A519 330 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 COCHO43405 550 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 ECI2O75521 394 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 SERPINC1P01008 464 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 TPM2P07951 284 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 USP17L7P0C7H9 530 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 SETSIPP0DME0 302 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 CDH5P33151 784 aaPredicted RBP12.05□□□□□ -0.48
SNX1-204ENST00000559061 TKTL1P51854 596 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 UBASH3AP57075 661 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 FMO1Q01740 532 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 USP4Q13107 963 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 PM20D1Q6GTS8 502 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 CMTM8Q8IZV2 173 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 ARL14EPQ8N8R7 260 aaPredicted RBP12.05□□□□□ -0.48
SNX1-204ENST00000559061 NEK11Q8NG66 645 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 OVCA2Q8WZ82 227 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 ELSPBP1Q96BH3 223 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 CPXM1Q96SM3 734 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 PCDHB18PQ96TA0 734 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 SLC4A5Q9BY07 1137 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 EPHX3Q9H6B9 360 aa12.05□□□□□ -0.48
SNX1-204ENST00000559061 YJEFN3A6XGL0 299 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 HEPACAM2A8MVW5 462 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 E7ENQ6 273 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 PI4K2BG5E9Z4 385 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 GOLGA6L19H0YKK7 550 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 TNFRSF10AO00220 468 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 MDM4O15151 490 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 PAPSS1O43252 624 aaPredicted RBP12.04□□□□□ -0.48
SNX1-204ENST00000559061 GREM1O60565 184 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 TBX18O95935 607 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 FYNP06241 537 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 MMEP08473 750 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 DAOAP59103 153 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 PDCLQ13371 301 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 GRM2Q14416 872 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 STILQ15468 1287 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 ZNF77Q15935 545 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 TAF12Q16514 161 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 PTPN20Q4JDL3 420 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 TAF3Q5VWG9 929 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 IRF2BP2Q7Z5L9 587 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 SCML4Q8N228 414 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 C1orf131Q8NDD1 294 aaKnown RBP12.04□□□□□ -0.48
SNX1-204ENST00000559061 MRPS31Q92665 395 aaKnown RBP12.04□□□□□ -0.48
SNX1-204ENST00000559061 CHFRQ96EP1 664 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 LHX5Q9H2C1 402 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 TRPC7Q9HCX4 862 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 CYLDQ9NQC7 956 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.04□□□□□ -0.48
SNX1-204ENST00000559061 IGSF9Q9P2J2 1179 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 HESX1Q9UBX0 185 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 NUDT5Q9UKK9 219 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 DUSP12Q9UNI6 340 aa12.04□□□□□ -0.48
SNX1-204ENST00000559061 DAAM1Q9Y4D1 1078 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms