RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 ZNF165P49910 485 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 SLC7A9P82251 487 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 ALCAMQ13740 583 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 HNRNPDQ14103 355 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 FAM171BQ6P995 826 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 SLC23A3Q6PIS1 610 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 TRMT11Q7Z4G4 463 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 FILIP1Q7Z7B0 1213 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 SFR1Q86XK3 245 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 ADGRG2Q8IZP9 1017 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 ALLCQ8N6M5 410 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 NOC3LQ8WTT2 800 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 PKMYT1Q99640 499 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 SYT15Q9BQS2 421 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 CBX8Q9HC52 389 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 TBC1D14Q9P2M4 693 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 STK17AQ9UEE5 414 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 SERTAD1Q9UHV2 236 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 MSRB2Q9Y3D2 182 aa17.06■□□□□ 0.32
CDC42BPB-203ENST00000558867 MYO16Q9Y6X6 1858 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 ANKRD11Q6UB99 2663 aaPredicted RBP17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 KIAA1549LQ6ZVL6 1849 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 ZFYVE26Q68DK2 2539 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 A0A087X0B3 334 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 UPK3BL1B0FP48 263 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 UPK3BL2E5RIL1 263 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 KIAA0391O15091 583 aaKnown RBP17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 KAT7O95251 611 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 GCNT3O95395 438 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 ABL1P00519 1130 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 TNNC2P02585 160 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 CYP17A1P05093 508 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 MYL1P05976 194 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 TIE1P35590 1138 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 GRIA2P42262 883 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 SIM1P81133 766 aaPredicted RBP17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 CYP27A1Q02318 531 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 GFPT1Q06210 699 aaPredicted RBP17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 IQCB1Q15051 598 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 DHCR24Q15392 516 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 SURF1Q15526 300 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 DUOXA1Q1HG43 343 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 CT47A1Q5JQC4 288 aaPredicted RBP17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 SLC36A4Q6YBV0 504 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 DYMQ7RTS9 669 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 TMEFF1Q8IYR6 380 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 KCNV2Q8TDN2 545 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 SAAL1Q96ER3 474 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 SLITRK1Q96PX8 696 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 TMEM121BQ9BXQ6 578 aaPredicted RBP17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 ARHGEF4Q9NR80 690 aa17.05■□□□□ 0.32
CDC42BPB-203ENST00000558867 CFIP05156 583 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 BDNFP23560 247 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 SOWAHAQ2M3V2 549 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 TDRD10Q5VZ19 366 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 BTBD8Q5XKL5 378 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 KIAA1211LQ6NV74 962 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 TMEM92Q6UXU6 159 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 SV2BQ7L1I2 683 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 ARMCX6Q7L4S7 300 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 IL17RCQ8NAC3 791 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 HMGB4Q8WW32 186 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 RLN3Q8WXF3 142 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 SLC6A14Q9UN76 642 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 LHX6Q9UPM6 363 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 CPQQ9Y646 472 aa17.04■□□□□ 0.32
CDC42BPB-203ENST00000558867 A0A0A0MRY4 1105 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 ZNF840PA6NDX5 716 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 HYAL3O43820 417 aaPredicted RBP17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 OPHN1O60890 802 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 PPP1R37O75864 691 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 SMC2O95347 1197 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 TOP3BO95985 862 aaKnown RBP17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 ADH5P11766 374 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 NOP14P78316 857 aaKnown RBP17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 PNOCQ13519 176 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 C11orf57Q6ZUT1 292 aaPredicted RBP17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 MYLPFQ96A32 169 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 OTUB2Q96DC9 234 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 HPDLQ96IR7 371 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 GSDMAQ96QA5 445 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 FNBP1Q96RU3 617 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 MMS19Q96T76 1030 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 TTLL2Q9BWV7 592 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 GTPBP2Q9BX10 602 aaKnown RBP17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 MTMR12Q9C0I1 747 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 ANAPC1Q9H1A4 1944 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 ASPMQ8IZT6 3477 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 PKD1L2Q7Z442 2459 aa17.03■□□□□ 0.32
CDC42BPB-203ENST00000558867 HELZP42694 1942 aaKnown RBP17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 TCRBV21S2A2A0A5A6 115 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 TBC1D3BA6NDS4 549 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 SGK1O00141 431 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 IKBKBO14920 756 aa17.02■□□□□ 0.32
CDC42BPB-203ENST00000558867 SYPP08247 313 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms