RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 PKP1Q13835 747 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 ZACNQ401N2 412 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 AASDHQ4L235 1098 aaPredicted RBP12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 C1orf220Q5T0J3 134 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 STPG1Q5TH74 334 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 PMS2CLQ68D20 193 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 C11orf74Q86VG3 221 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 C12orf40Q86WS4 652 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 SFTPA1Q8IWL2 248 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 ETFBKMTQ8IXQ9 262 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 GRAMD1CQ8IYS0 662 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 IL17RCQ8NAC3 791 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 ZMIZ2Q8NF64 920 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 SCAMP5Q8TAC9 235 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 OTUB2Q96DC9 234 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 CFAP97Q9P2B7 532 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 TBC1D14Q9P2M4 693 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 HPSEQ9Y251 543 aa12.53□□□□□ -0.4
SEMA4B-205ENST00000558848 CNOT1A5YKK6 2376 aaKnown RBP12.52□□□□□ -0.4
SEMA4B-205ENST00000558848 FAM237AA0A1B0GTK4 181 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 PDXKO00764 312 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 IKBKBO14920 756 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 HOXC11O43248 304 aaPredicted RBP12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 RHOBTB1O94844 696 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 KAT7O95251 611 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 RPN1P04843 607 aaKnown RBP12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 PMLP29590 882 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 PGFP49763 221 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 DGKEP52429 567 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 SLC5A3P53794 718 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 DLG4P78352 724 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 DNM1Q05193 864 aaKnown RBP12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 ELF2Q15723 593 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 ZNF699Q32M78 642 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 C2orf27AQ580R0 203 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 C12orf50Q8NA57 414 aaPredicted RBP12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 TTC16Q8NEE8 873 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 MDGA1Q8NFP4 955 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 TSTD1Q8NFU3 115 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 TMC2Q8TDI7 906 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 TAF4BQ92750 862 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 TNIP3Q96KP6 325 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 PNKPQ96T60 521 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 SMOQ99835 787 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 LSM14BQ9BX40 385 aaKnown RBP12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 SMOC1Q9H4F8 434 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 DMAP1Q9NPF5 467 aaPredicted RBP12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 SMPD4Q9NXE4 827 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 CHORDC1Q9UHD1 332 aaPredicted RBP12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 CFAP45Q9UL16 551 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 TRAF3IP3Q9Y228 551 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 ATG2BQ96BY7 2078 aa12.52□□□□□ -0.41
SEMA4B-205ENST00000558848 RALGAPA1Q6GYQ0 2036 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 MAPK13O15264 365 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 ADAM23O75077 832 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 PHACTR2O75167 634 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 BEST1O76090 585 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 ADH1CP00326 375 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 ASS1P00966 412 aaKnown RBP12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 MYL1P05976 194 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 ADH5P11766 374 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 CMA1P23946 247 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 GRIA2P42262 883 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 TNFRSF4P43489 277 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 ASPAP45381 313 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 SHC2P98077 582 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 NFIL3Q16649 462 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 SGSM1Q2NKQ1 1148 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 KMT5BQ4FZB7 885 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 LY6G5CQ5SRR4 150 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 FOXD4L5Q5VV16 416 aaPredicted RBP12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 IL31Q6EBC2 164 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 TCEAL6Q6IPX3 200 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 SV2AQ7L0J3 742 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 UNC93AQ86WB7 457 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 CEP57L1Q8IYX8 460 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 KCNV2Q8TDN2 545 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 FOXD4L4Q8WXT5 416 aaPredicted RBP12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 TCEAL3Q969E4 200 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 FBXO32Q969P5 355 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 ELMO3Q96BJ8 720 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 SMARCD1Q96GM5 515 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 CCSER2Q9H7U1 834 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 HMGXB4Q9UGU5 601 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 HCN2Q9UL51 889 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 CACNA1BQ00975 2339 aa12.51□□□□□ -0.41
SEMA4B-205ENST00000558848 ASPMQ8IZT6 3477 aa12.5□□□□□ -0.41
SEMA4B-205ENST00000558848 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.5□□□□□ -0.41
SEMA4B-205ENST00000558848 HHLA1C9JL84 531 aa12.5□□□□□ -0.41
SEMA4B-205ENST00000558848 SGK1O00141 431 aa12.5□□□□□ -0.41
SEMA4B-205ENST00000558848 CAVIN2O95810 425 aa12.5□□□□□ -0.41
SEMA4B-205ENST00000558848 ABL1P00519 1130 aa12.5□□□□□ -0.41
SEMA4B-205ENST00000558848 MBL2P11226 248 aaPredicted RBP12.5□□□□□ -0.41
SEMA4B-205ENST00000558848 P2RY2P41231 377 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms