RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 TRIM66O15016 1216 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 TADA3O75528 432 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 ANP32AP39687 249 aaKnown RBP16.23■□□□□ 0.19
RPL28-206ENST00000558752 DPP6P42658 865 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 NOVA1P51513 510 aaKnown RBP16.23■□□□□ 0.19
RPL28-206ENST00000558752 VAMP7P51809 220 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 BIRC3Q13489 604 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 PNOCQ13519 176 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 BYSLQ13895 437 aaKnown RBP16.23■□□□□ 0.19
RPL28-206ENST00000558752 HSF5Q4G112 596 aaPredicted RBP16.23■□□□□ 0.19
RPL28-206ENST00000558752 PKMYT1Q99640 499 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 SYT15Q9BQS2 421 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 GCNT4Q9P109 453 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 MAPK8IP1Q9UQF2 711 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 PCDHA5Q9Y5H7 936 aa16.23■□□□□ 0.19
RPL28-206ENST00000558752 OBSL1O75147 1896 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 FRYQ5TBA9 3013 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 C4orf47A7E2U8 309 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 CETN3O15182 167 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 GTF2H1P32780 548 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 CASP4P49662 377 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 MYL6P60660 151 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 MRPS21P82921 87 aaKnown RBP16.22■□□□□ 0.19
RPL28-206ENST00000558752 STIM1Q13586 685 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 NCOA4Q13772 614 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 COL9A2Q14055 689 aaPredicted RBP16.22■□□□□ 0.19
RPL28-206ENST00000558752 ZACNQ401N2 412 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 ZCWPW2Q504Y3 356 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 TDRD10Q5VZ19 366 aaKnown RBP16.22■□□□□ 0.19
RPL28-206ENST00000558752 PMS2CLQ68D20 193 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 SCARA3Q6AZY7 606 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 PSAPL1Q6NUJ1 521 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 CYP2U1Q7Z449 544 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 DDX42Q86XP3 938 aaKnown RBP eCLIP16.22■□□□□ 0.19
RPL28-206ENST00000558752 STKLD1Q8NE28 680 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 PLEKHO2Q8TD55 490 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 USP33Q8TEY7 942 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 KBTBD7Q8WVZ9 684 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 SPACA7Q96KW9 195 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 CNOT6LQ96LI5 555 aaKnown RBP16.22■□□□□ 0.19
RPL28-206ENST00000558752 TSG101Q99816 390 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 XYLT2Q9H1B5 865 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 SMOC1Q9H4F8 434 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 TMEM9BQ9NQ34 198 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 BAHCC1Q9P281 2608 aa16.22■□□□□ 0.19
RPL28-206ENST00000558752 STX10O60499 249 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 PRCPP42785 496 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 FKBP3Q00688 224 aaKnown RBP16.21■□□□□ 0.19
RPL28-206ENST00000558752 CYP27A1Q02318 531 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 PREPLQ4J6C6 727 aaPredicted RBP16.21■□□□□ 0.19
RPL28-206ENST00000558752 C2orf27AQ580R0 203 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 ZNF667Q5HYK9 610 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 SV2AQ7L0J3 742 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 OSTM1Q86WC4 334 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 FAM186BQ8IYM0 893 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 RIN3Q8TB24 985 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 MYCBPAPQ8TBZ2 947 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 FAXDC2Q96IV6 333 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 FAM84AQ96KN4 292 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 SLITRK1Q96PX8 696 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 SLC22A12Q96S37 553 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 POLMQ9NP87 494 aaPredicted RBP16.21■□□□□ 0.19
RPL28-206ENST00000558752 MMP17Q9ULZ9 603 aa16.21■□□□□ 0.19
RPL28-206ENST00000558752 C2orf78A6NCI8 922 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 LEFTY2O00292 366 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 DCLK1O15075 740 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 MAP3K13O43283 966 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 PROS1P07225 676 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 PDGFRBP09619 1106 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 CEACAM1P13688 526 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 BDNFP23560 247 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 LMO2P25791 158 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 EIF2DP41214 584 aaKnown RBP16.2■□□□□ 0.18
RPL28-206ENST00000558752 UBE2HP62256 183 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 SLC7A9P82251 487 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 LRRC63Q05C16 580 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 LMAN2Q12907 356 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 ZNF699Q32M78 642 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 TCEAL6Q6IPX3 200 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 ANO7Q6IWH7 933 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 NUDT18Q6ZVK8 323 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 RASSF3Q86WH2 238 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 OR6B3Q8NGW1 331 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 TCEAL3Q969E4 200 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 MYLPFQ96A32 169 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 DHTKD1Q96HY7 919 aaPredicted RBP16.2■□□□□ 0.18
RPL28-206ENST00000558752 PNKPQ96T60 521 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 DNAI2Q9GZS0 605 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 LINC00597Q9H2U6 94 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 TBC1D14Q9P2M4 693 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 NXF1Q9UBU9 619 aaKnown RBP16.2■□□□□ 0.18
RPL28-206ENST00000558752 EML5Q05BV3 1969 aa16.2■□□□□ 0.18
RPL28-206ENST00000558752 LNP1A1A4G5 178 aa16.19■□□□□ 0.18
RPL28-206ENST00000558752 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.19■□□□□ 0.18
RPL28-206ENST00000558752 ADH1CP00326 375 aa16.19■□□□□ 0.18
RPL28-206ENST00000558752 APODP05090 189 aa16.19■□□□□ 0.18
RPL28-206ENST00000558752 EPB41P11171 864 aaKnown RBP16.19■□□□□ 0.18
RPL28-206ENST00000558752 PTPN1P18031 435 aaKnown RBP16.19■□□□□ 0.18
RPL28-206ENST00000558752 TRIM21P19474 475 aaKnown RBP16.19■□□□□ 0.18
RPL28-206ENST00000558752 CSRP1P21291 193 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms