RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 MYRFLQ96LU7 910 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 TUBGCP2Q9BSJ2 902 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 LRRC3Q9BY71 257 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 TRPV4Q9HBA0 871 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 PNPLA8Q9NP80 782 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 UBE2TQ9NPD8 197 aaPredicted RBP8.81□□□□□ -1
PSEN1-223ENST00000557511 SLC2A4RGQ9NR83 387 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 EVA1BQ9NVM1 165 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 OBP2AQ9NY56 170 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 HMGXB4Q9UGU5 601 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 CA14Q9ULX7 337 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 HCN4Q9Y3Q4 1203 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 NFE2L3Q9Y4A8 694 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 XIRP2A4UGR9 3374 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 TSC2P49815 1807 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 GTPBP10A4D1E9 387 aaKnown RBP8.8□□□□□ -1
PSEN1-223ENST00000557511 HEPACAM2A8MVW5 462 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 MED7O43513 233 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 MOSPD3O75425 235 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 PAEPP09466 180 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 NPR3P17342 541 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 HDCP19113 662 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 WEE1P30291 646 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 GDI1P31150 447 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 USP8P40818 1118 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 VIPR2P41587 438 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 KPNA1P52294 538 aaPredicted RBP8.8□□□□□ -1
PSEN1-223ENST00000557511 SLC5A3P53794 718 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 GPC5P78333 572 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 AMPD2Q01433 879 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 GOLGA8FQ08AF8 430 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 GOLGA8DPQ0D2H9 430 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 TAF10Q12962 218 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 KLHL40Q2TBA0 621 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 VWA3BQ502W6 1294 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 ARHGAP29Q52LW3 1261 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 HSP90AA4PQ58FG1 418 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 TXNDC8Q6A555 127 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 RRAGAQ7L523 313 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 BMP8AQ7Z5Y6 402 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 TADA2BQ86TJ2 420 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 DDX42Q86XP3 938 aaKnown RBP eCLIP8.8□□□□□ -1
PSEN1-223ENST00000557511 MFSD6LQ8IWD5 586 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 FUKQ8N0W3 1084 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 SIX5Q8N196 739 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 ST13P5Q8NFI4 369 aaPredicted RBP8.8□□□□□ -1
PSEN1-223ENST00000557511 BPIFB1Q8TDL5 484 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 DNASE1L2Q92874 299 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 KCNK16Q96T55 309 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 CRACR2AQ9BSW2 395 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 LRFN3Q9BTN0 628 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 DUSP16Q9BY84 665 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 NDST4Q9H3R1 872 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 TLR8Q9NR97 1041 aaKnown RBP8.8□□□□□ -1
PSEN1-223ENST00000557511 TDP1Q9NUW8 608 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 MRPS17Q9Y2R5 130 aaKnown RBP8.8□□□□□ -1
PSEN1-223ENST00000557511 NME7Q9Y5B8 376 aa8.8□□□□□ -1
PSEN1-223ENST00000557511 REV3LO60673 3130 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 MAN2B1O00754 1011 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 CHADO15335 359 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 NCAM2O15394 837 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 NARSO43776 548 aaKnown RBP8.79□□□□□ -1
PSEN1-223ENST00000557511 LRRN2O75325 713 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 RALAP11233 206 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 ACO1P21399 889 aaKnown RBP8.79□□□□□ -1
PSEN1-223ENST00000557511 IFNAR2P48551 515 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 BCAT1P54687 386 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 RAD23BP54727 409 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 PRKCQQ04759 706 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 TYRO3Q06418 890 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 NR1H3Q13133 447 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 GRM2Q14416 872 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 ZNF268Q14587 947 aaPredicted RBP8.79□□□□□ -1
PSEN1-223ENST00000557511 ARHGAP44Q17R89 818 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 GOLGA7BQ2TAP0 167 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 TCP11X2Q5H9J9 407 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 HECTD3Q5T447 861 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 STXBP5Q5T5C0 1151 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 PPP1R26Q5T8A7 1209 aaPredicted RBP8.79□□□□□ -1
PSEN1-223ENST00000557511 ARHGAP17Q68EM7 881 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 C1orf228Q6PIY5 440 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 ARHGAP18Q8N392 663 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 FBXL6Q8N531 539 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 ANKRD52Q8NB46 1076 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 SLC4A11Q8NBS3 891 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 RBBP8NLQ8NC74 664 aaPredicted RBP8.79□□□□□ -1
PSEN1-223ENST00000557511 GOLGA1Q92805 767 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 MSANTD3Q96H12 275 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 ZSWIM3Q96MP5 696 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 TWNKQ96RR1 684 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 CDK5RAP1Q96SZ6 601 aaKnown RBP8.79□□□□□ -1
PSEN1-223ENST00000557511 PRRX2Q99811 253 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 ARID3AQ99856 593 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 TTLL2Q9BWV7 592 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 SLC46A2Q9BY10 475 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 UBXN6Q9BZV1 441 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 PDCL3Q9H2J4 239 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 LRRC4Q9HBW1 653 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 CSNK1G1Q9HCP0 422 aa8.79□□□□□ -1
PSEN1-223ENST00000557511 ARHGEF3Q9NR81 526 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms