RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 TRIM16O95361 564 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 SERPINF2P08697 491 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
SNX6-209ENST00000557265 GNL1P36915 607 aaPredicted RBP13.1□□□□□ -0.31
SNX6-209ENST00000557265 CACNA2D1P54289 1103 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 FAM193AP78312 1265 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 RPL6Q02878 288 aaKnown RBP13.1□□□□□ -0.31
SNX6-209ENST00000557265 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
SNX6-209ENST00000557265 ALCAMQ13740 583 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 RABEP1Q15276 862 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 BRAPQ7Z569 592 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 DDX42Q86XP3 938 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNX6-209ENST00000557265 CBWD2Q8IUF1 395 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 PHTF2Q8N3S3 785 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 NAT16Q8N8M0 369 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 OR2I1PQ8NGU4 316 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 SLITRK1Q96PX8 696 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
SNX6-209ENST00000557265 TMEM30AQ9NV96 361 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 TBC1D14Q9P2M4 693 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 SMC3Q9UQE7 1217 aa13.1□□□□□ -0.31
SNX6-209ENST00000557265 ASCC3Q8N3C0 2202 aaKnown RBP13.1□□□□□ -0.31
SNX6-209ENST00000557265 DENND4CQ5VZ89 1909 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 THADAQ6YHU6 1953 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 E2F8A0AVK6 867 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 TAF4O00268 1085 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 OBSL1O75147 1896 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 GABRG2P18507 467 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 YWHAQP27348 245 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 GAD2Q05329 585 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 BTBD8Q5XKL5 378 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 SLC36A4Q6YBV0 504 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 MINDY1Q8N5J2 469 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 ZNF513Q8N8E2 541 aaPredicted RBP13.09□□□□□ -0.31
SNX6-209ENST00000557265 OR6B3Q8NGW1 331 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 KCNV2Q8TDN2 545 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 CLIC6Q96NY7 704 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 ZNF518BQ9C0D4 1074 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 CAPN10Q9HC96 672 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 PANK4Q9NVE7 773 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 CALCOCO1Q9P1Z2 691 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 NME7Q9Y5B8 376 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 CLIC4Q9Y696 253 aa13.09□□□□□ -0.31
SNX6-209ENST00000557265 ZNF638Q14966 1978 aaKnown RBP13.09□□□□□ -0.31
SNX6-209ENST00000557265 FRMD3A2A2Y4 597 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 FAM221BA6H8Z2 402 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 ARHGAP33O14559 1287 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 KIAA0391O15091 583 aaKnown RBP13.08□□□□□ -0.32
SNX6-209ENST00000557265 COCHO43405 550 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 TULP3O75386 442 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 TACC1O75410 805 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
SNX6-209ENST00000557265 CST3P01034 146 aaPredicted RBP13.08□□□□□ -0.32
SNX6-209ENST00000557265 CD59P13987 128 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 PTPN1P18031 435 aaKnown RBP13.08□□□□□ -0.32
SNX6-209ENST00000557265 WASP42768 502 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 SURF1Q15526 300 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 C10orf76Q5T2E6 689 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 TRAPPC11Q7Z392 1133 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 TRMT11Q7Z4G4 463 aaKnown RBP13.08□□□□□ -0.32
SNX6-209ENST00000557265 RABEPKQ7Z6M1 372 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 TMEM25Q86YD3 366 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 WDR49Q8IV35 697 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 ETFBKMTQ8IXQ9 262 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 OTUB2Q96DC9 234 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 ZFRQ96KR1 1074 aaKnown RBP13.08□□□□□ -0.32
SNX6-209ENST00000557265 B3GNT5Q9BYG0 378 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 ELOVL4Q9GZR5 314 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 DPEP3Q9H4B8 488 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 DEC1Q9P2X7 70 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 CHORDC1Q9UHD1 332 aaPredicted RBP13.08□□□□□ -0.32
SNX6-209ENST00000557265 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
SNX6-209ENST00000557265 HCN2Q9UL51 889 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 SH3BP1Q9Y3L3 701 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 SRPRBQ9Y5M8 271 aaKnown RBP13.08□□□□□ -0.32
SNX6-209ENST00000557265 NUP205Q92621 2012 aa13.08□□□□□ -0.32
SNX6-209ENST00000557265 TCHHQ07283 1943 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 IGHV1OR15-9A0A0B4J2B8 117 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 A0A1W2PQF6 199 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 CLDN5O00501 218 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 TRIM24O15164 1050 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 ZBTB24O43167 697 aaPredicted RBP13.07□□□□□ -0.32
SNX6-209ENST00000557265 HOXC11O43248 304 aaPredicted RBP13.07□□□□□ -0.32
SNX6-209ENST00000557265 CAPNS1P04632 268 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 HOXB2P14652 356 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 NTSR1P30989 418 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 TXLNAP40222 546 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 ZNF423Q2M1K9 1284 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 ANO4Q32M45 955 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 PREPLQ4J6C6 727 aaPredicted RBP13.07□□□□□ -0.32
SNX6-209ENST00000557265 HECTD3Q5T447 861 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 CCDC73Q6ZRK6 1079 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 RAB44Q7Z6P3 723 aaPredicted RBP13.07□□□□□ -0.32
SNX6-209ENST00000557265 PROSER1Q86XN7 944 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 MIB1Q86YT6 1006 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 SLC41A1Q8IVJ1 513 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms