RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 C12orf29Q8N999 325 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 SCAMP5Q8TAC9 235 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 RIN3Q8TB24 985 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 ERCC4Q92889 916 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-216ENST00000556682 CD101Q93033 1021 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 CEP63Q96MT8 703 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 SMOQ99835 787 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 LINC00597Q9H2U6 94 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 PNPLA8Q9NP80 782 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 TLR8Q9NR97 1041 aaKnown RBP11.42□□□□□ -0.58
XRCC3-216ENST00000556682 SMPD4Q9NXE4 827 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 HMGXB4Q9UGU5 601 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 MAN1B1Q9UKM7 699 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 RAB23Q9ULC3 237 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 SH3BP1Q9Y3L3 701 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 COL4A3Q01955 1670 aa11.42□□□□□ -0.58
XRCC3-216ENST00000556682 NUP210Q8TEM1 1887 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-216ENST00000556682 MIA3Q5JRA6 1907 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 E2F8A0AVK6 867 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 PMS1P54277 932 aaKnown RBP11.41□□□□□ -0.58
XRCC3-216ENST00000556682 GOLGA8FQ08AF8 430 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 GOLGA8DPQ0D2H9 430 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 GAS6Q14393 721 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 CCDC40Q4G0X9 1142 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 ZNF394Q53GI3 561 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 ISM2Q6H9L7 571 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 FSTL4Q6MZW2 842 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 FOXR2Q6PJQ5 311 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 Q6ZS52 159 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 CLEC20AQ6ZU45 233 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 TADA2BQ86TJ2 420 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 SUMF1Q8NBK3 374 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 SEMA4DQ92854 862 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 OTUB2Q96DC9 234 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 TMEM176AQ96HP8 235 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 TWNKQ96RR1 684 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 DUSP16Q9BY84 665 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 EPC1Q9H2F5 836 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 GMIPQ9P107 970 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 CFAP97Q9P2B7 532 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 NCDNQ9UBB6 729 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 SLC8A2Q9UPR5 921 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 COQ4Q9Y3A0 265 aa11.41□□□□□ -0.58
XRCC3-216ENST00000556682 CACNA1IQ9P0X4 2223 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 TRIM49BA6NDI0 452 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 COCHO43405 550 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 BEST1O76090 585 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 FGFR1OPO95684 399 aaKnown RBP11.4□□□□□ -0.58
XRCC3-216ENST00000556682 GNA14O95837 355 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 ADH1CP00326 375 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 ZDHHC11BP0C7U3 371 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 TDGF1P13385 188 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 ACO1P21399 889 aaKnown RBP11.4□□□□□ -0.58
XRCC3-216ENST00000556682 TBXAS1P24557 533 aaPredicted RBP11.4□□□□□ -0.58
XRCC3-216ENST00000556682 HOXA6P31267 233 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 PSEN1P49768 467 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 KLHL10Q6JEL2 608 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 LONP2Q86WA8 852 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 ADGRG2Q8IZP9 1017 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 GPR161Q8N6U8 529 aaKnown RBP11.4□□□□□ -0.58
XRCC3-216ENST00000556682 ZMIZ2Q8NF64 920 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 WHAMMQ8TF30 809 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 TATDN2Q93075 761 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 CHFRQ96EP1 664 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 CISHQ9NSE2 258 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 CHMP5Q9NZZ3 219 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 GMEB2Q9UKD1 530 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 SCML2Q9UQR0 700 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 TICRRQ7Z2Z1 1910 aa11.4□□□□□ -0.58
XRCC3-216ENST00000556682 ZFHX2Q9C0A1 2572 aaPredicted RBP11.4□□□□□ -0.58
XRCC3-216ENST00000556682 CHURC1-FNTBB4DL54 471 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 TLR5O60602 858 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 RNF40O75150 1001 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 GADD45BO75293 160 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-216ENST00000556682 EGFP01133 1207 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 RALAP11233 206 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 ATP5C1P36542 298 aaKnown RBP11.39□□□□□ -0.59
XRCC3-216ENST00000556682 KIF11P52732 1056 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 UBE2HP62256 183 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 ZXDBP98169 803 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 MORC3Q14149 939 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 DHCR24Q15392 516 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 PREPLQ4J6C6 727 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-216ENST00000556682 CBWD6Q4V339 395 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 CBWD3Q5JTY5 395 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 CBWD5Q5RIA9 395 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 PPP1R26Q5T8A7 1209 aaPredicted RBP11.39□□□□□ -0.59
XRCC3-216ENST00000556682 NUDT18Q6ZVK8 323 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 CAMKK1Q8N5S9 505 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 TRIML1Q8N9V2 468 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 NELFBQ8WX92 580 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 SLC35C1Q96A29 364 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 JAKMIP2Q96AA8 810 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 ACDQ96AP0 544 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 CDK5RAP1Q96SZ6 601 aaKnown RBP11.39□□□□□ -0.59
XRCC3-216ENST00000556682 UBXN6Q9BZV1 441 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 CCSER2Q9H7U1 834 aa11.39□□□□□ -0.59
XRCC3-216ENST00000556682 LSM7Q9UK45 103 aaKnown RBP11.39□□□□□ -0.59
XRCC3-216ENST00000556682 SMG5Q9UPR3 1016 aaKnown RBP11.39□□□□□ -0.59
XRCC3-216ENST00000556682 PTPRZ1P23471 2315 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms