RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 NOC3LQ8WTT2 800 aaKnown RBP12.67□□□□□ -0.38
ACTN1-221ENST00000556571 OTUB2Q96DC9 234 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 PCED1BQ96HM7 432 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 SLITRK1Q96PX8 696 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 PCIF1Q9H4Z3 704 aa12.67□□□□□ -0.38
ACTN1-221ENST00000556571 ANAPC1Q9H1A4 1944 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 MYO16Q9Y6X6 1858 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 E2F8A0AVK6 867 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 TBC1D3BA6NDS4 549 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 SCAMP3O14828 347 aaKnown RBP12.66□□□□□ -0.38
ACTN1-221ENST00000556571 OPHN1O60890 802 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 FAM163BP0C2L3 166 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 MBL2P11226 248 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-221ENST00000556571 GNL1P36915 607 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-221ENST00000556571 CASP5P51878 434 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 RPL6Q02878 288 aaKnown RBP12.66□□□□□ -0.38
ACTN1-221ENST00000556571 GAD2Q05329 585 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 KDSRQ06136 332 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 TAF10Q12962 218 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 LY6G5CQ5SRR4 150 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 RRAGBQ5VZM2 374 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 BTBD8Q5XKL5 378 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 LARP1BQ659C4 914 aaKnown RBP12.66□□□□□ -0.38
ACTN1-221ENST00000556571 NUDT18Q6ZVK8 323 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 USP49Q70CQ1 688 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 OR5B17Q8NGF7 314 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 MMS19Q96T76 1030 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 GTPBP2Q9BX10 602 aaKnown RBP12.66□□□□□ -0.38
ACTN1-221ENST00000556571 SNX25Q9H3E2 840 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 CAPN10Q9HC96 672 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 KIAA1549LQ6ZVL6 1849 aa12.66□□□□□ -0.38
ACTN1-221ENST00000556571 ATXN2Q99700 1313 aaKnown RBP12.65□□□□□ -0.38
ACTN1-221ENST00000556571 ZNF233A6NK53 670 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 ZBTB24O43167 697 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-221ENST00000556571 TACC1O75410 805 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 IDEP14735 1019 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 TXLNAP40222 546 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 ZNF33AQ06730 810 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 ZNF423Q2M1K9 1284 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 MDH1BQ5I0G3 518 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 HS2ST1Q7LGA3 356 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 PHTF2Q8N3S3 785 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 ZNF513Q8N8E2 541 aaPredicted RBP12.65□□□□□ -0.38
ACTN1-221ENST00000556571 PDZD8Q8NEN9 1154 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 ELOVL4Q9GZR5 314 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 ZDHHC4Q9NPG8 344 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 DEC1Q9P2X7 70 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 SMC3Q9UQE7 1217 aa12.65□□□□□ -0.38
ACTN1-221ENST00000556571 MYO18AQ92614 2054 aaKnown RBP12.65□□□□□ -0.39
ACTN1-221ENST00000556571 PTPRJQ12913 1337 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 FRMD3A2A2Y4 597 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 ARHGAP33O14559 1287 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 HOXC11O43248 304 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-221ENST00000556571 ZNF217O75362 1048 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 TULP3O75386 442 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 PRPF6O94906 941 aaKnown RBP12.64□□□□□ -0.39
ACTN1-221ENST00000556571 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-221ENST00000556571 SYPP08247 313 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 PTPN1P18031 435 aaKnown RBP12.64□□□□□ -0.39
ACTN1-221ENST00000556571 GABRG2P18507 467 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 YWHAQP27348 245 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 SLC14A1Q13336 389 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 TRAPPC11Q7Z392 1133 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 WDR49Q8IV35 697 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 ETFBKMTQ8IXQ9 262 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 NUP93Q8N1F7 819 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 CHCHD4Q8N4Q1 142 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 MINDY1Q8N5J2 469 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 OR6B3Q8NGW1 331 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 OVCA2Q8WZ82 227 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 DUSP9Q99956 384 aaKnown RBP12.64□□□□□ -0.39
ACTN1-221ENST00000556571 MRPL45Q9BRJ2 306 aaKnown RBP12.64□□□□□ -0.39
ACTN1-221ENST00000556571 KIAA1586Q9HCI6 787 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 FSCN3Q9NQT6 498 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 PANK4Q9NVE7 773 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 SH3BP1Q9Y3L3 701 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 PTPRDP23468 1912 aa12.64□□□□□ -0.39
ACTN1-221ENST00000556571 WDFY3Q8IZQ1 3526 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 A0A1W2PQD8 194 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 TAF4O00268 1085 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 CD59P13987 128 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 NTSR1P30989 418 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 FAM193AP78312 1265 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 IFRD2Q12894 506 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-221ENST00000556571 C10orf76Q5T2E6 689 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 HECTD3Q5T447 861 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 SDE2Q6IQ49 451 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 CCDC73Q6ZRK6 1079 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 STXBP4Q6ZWJ1 553 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 RAB44Q7Z6P3 723 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-221ENST00000556571 PROSER1Q86XN7 944 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 CBWD2Q8IUF1 395 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 DEFB119Q8N690 84 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 NAT16Q8N8M0 369 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 FGFBP2Q9BYJ0 223 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 ZNF518BQ9C0D4 1074 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 SPHK2Q9NRA0 654 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 DNAAF2Q9NVR5 837 aaKnown RBP12.63□□□□□ -0.39
ACTN1-221ENST00000556571 CALCOCO1Q9P1Z2 691 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms