RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ZNF280CQ8ND82 737 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 ZSWIM2Q8NEG5 633 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 RXFP2Q8WXD0 754 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 MMADHCQ9H3L0 296 aaPredicted RBP15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 KCNK4Q9NYG8 393 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 DUOX1Q9NRD9 1551 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 SDR42E2A6NKP2 422 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 FDFT1P37268 417 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 TBL3Q12788 808 aaKnown RBP15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.57■□□□□ 0.085e-8■■□□□ 12.5
ARHGEF40-207ENST00000556399 BBS5Q8N3I7 341 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 RNF139Q8WU17 664 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 FAM172AQ8WUF8 416 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 CLPTM1O96005 669 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 DPYSL3Q14195 570 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 THEMIS2Q5TEJ8 643 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 SEMA4DQ92854 862 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 THAP1Q9NVV9 213 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 GLRA2P23416 452 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 GRK2P25098 689 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 CNTFP26441 200 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 LLGL2Q6P1M3 1020 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 C6orf89Q6UWU4 347 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 TMEM161BQ8NDZ6 487 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 GDPD5Q8WTR4 605 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 SPOCK2Q92563 424 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 ZBTB45Q96K62 511 aaPredicted RBP15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 SLC5A4Q9NY91 659 aa15.57■□□□□ 0.08
ARHGEF40-207ENST00000556399 EEF2KO00418 725 aaKnown RBP15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 HSPA13P48723 471 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 SIK2Q9H0K1 926 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 CAAP1Q9H8G2 361 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 C3orf70A6NLC5 250 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 AHCYL1O43865 530 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 UGP2Q16851 508 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 TCHHL1Q5QJ38 904 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 N4BP2L1Q5TBK1 243 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 KDELC2Q7Z4H8 507 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 DDIASQ8IXT1 998 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 OR6P1Q8NGX9 317 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 RHBDL2Q9NX52 303 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 FAM198AQ9UFP1 575 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 RPL26L1Q9UNX3 145 aaKnown RBP15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 PCDHA2Q9Y5H9 948 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 H0YGN5 161 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 LIN7AO14910 233 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 SUPT3HO75486 399 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 PDE5AO76074 875 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 KCNA4P22459 653 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 SLC1A6P48664 564 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 OCA2Q04671 838 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 DCAF12L1Q5VU92 463 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 PTPRN2Q92932 1015 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 KRT82Q9NSB4 513 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 NFS1Q9Y697 457 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 APOC4-APOC2K7ER74 178 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 ALOX15BO15296 676 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 APOC2P02655 101 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 VDRP11473 427 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 IYDQ6PHW0 289 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 BNC2Q6ZN30 1099 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 TNIP3Q96KP6 325 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 FAM192AQ9GZU8 254 aa15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 FBXO6Q9NRD1 293 aaPredicted RBP15.56■□□□□ 0.08
ARHGEF40-207ENST00000556399 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 DFFAO00273 331 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 AP1G2O75843 785 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 PTGER2P43116 358 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 RPL7AP62424 266 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 PTPN11Q06124 597 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 INPP5AQ14642 412 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 WLSQ5T9L3 541 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 PLEKHA5Q9HAU0 1116 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 LRRC4CQ9HCJ2 640 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 ZNRF3Q9ULT6 936 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 GOLGA8CPA6NN73 597 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 CPA3P15088 417 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 RPL22P35268 128 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 TCF7P36402 384 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 GSCP56915 257 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 LRRC38Q5VT99 294 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 CCNJLQ8IV13 435 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 USP33Q8TEY7 942 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 GIPC2Q8TF65 315 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 ZNF189O75820 626 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 TXNP10599 105 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 NOMO3P69849 1222 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 LAYNQ6UX15 382 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 C12orf50Q8NA57 414 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 PYDC1Q8WXC3 89 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 ELMO2Q96JJ3 720 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 FAM84AQ96KN4 292 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 ZNF317Q96PQ6 595 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 ACSS3Q9H6R3 686 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 NMRK1Q9NWW6 199 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 ATP8B3O60423 1300 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 ITGAVP06756 1048 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 KDELR1P24390 212 aa15.55■□□□□ 0.08
ARHGEF40-207ENST00000556399 ACVR2BQ13705 512 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms