RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 CELF3Q5SZQ8 465 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 STK40Q8N2I9 435 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 ZNF655Q8N720 491 aaPredicted RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 C2orf15Q8WU43 125 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 RNPC3Q96LT9 517 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 FHDC1Q9C0D6 1143 aaPredicted RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 AIPL1Q9NZN9 384 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 FNDC3AQ9Y2H6 1198 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 Q9Y3F1 56 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 RASA4BC9J798 803 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 LSM1O15116 133 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 RASA4O43374 803 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 PRLRP16471 622 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 NPTX2P47972 431 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 CYP24A1Q07973 514 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 GRIK3Q13003 919 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 KHDRBS2Q5VWX1 349 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 GPAT2Q6NUI2 795 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 DHX40Q8IX18 779 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 PTPRN2Q92932 1015 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 SYT15Q9BQS2 421 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 TARS2Q9BW92 718 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 RNF208Q9H0X6 261 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 PSMC3IPQ9P2W1 217 aaPredicted RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 PRELID1Q9Y255 219 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 TNFSF13BQ9Y275 285 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 ADGRG1Q9Y653 693 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 GUCY1B2O75343 617 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 ITGB3P05106 788 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 CKMP06732 381 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 PFKMP08237 780 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 TRIM49P0CI25 452 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 TRIM49CP0CI26 452 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 HPCAP84074 193 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 CYB5D1Q6P9G0 228 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 ASB2Q96Q27 587 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 GAS2L1Q99501 681 aaPredicted RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 AVENQ9NQS1 362 aaPredicted RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 KBTBD4Q9NVX7 518 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 TRAF3IP3Q9Y228 551 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 C2CD2Q9Y426 696 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 UBA6A0AVT1 1052 aaPredicted RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 TTLL13PA6NNM8 815 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 C5orf58C9J3I9 102 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 FAM107AO95990 144 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 S100A9P06702 114 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 FAM163BP0C2L3 166 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 NCAM1P13591 858 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 SLC2A4P14672 509 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 CHKAP35790 457 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 SULT2A1Q06520 285 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 FSTL1Q12841 308 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 PDIA2Q13087 525 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 INPP5AQ14642 412 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 CEP78Q5JTW2 689 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 ADAT2Q7Z6V5 191 aaKnown RBP8.72□□□□□ -1.01
LINC00641-201ENST00000555379 TMEM176AQ96HP8 235 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 CEP19Q96LK0 163 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 MCM8Q9UJA3 840 aa8.72□□□□□ -1.01
LINC00641-201ENST00000555379 SMIM35A0A1B0GVV1 85 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 AHCYL1O43865 530 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 UPP2O95045 317 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 HOXB6P17509 224 aaKnown RBP8.71□□□□□ -1.01
LINC00641-201ENST00000555379 ACOT2P49753 483 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 NSUN2Q08J23 767 aaKnown RBP eCLIP8.71□□□□□ -1.01
LINC00641-201ENST00000555379 IRF5Q13568 498 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 C16orf72Q14CZ0 275 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 ANGPT1Q15389 498 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 FAM83EQ2M2I3 478 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 AGAP9Q5VTM2 703 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 FAM46CQ5VWP2 391 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 GET4Q7L5D6 327 aaPredicted RBP8.71□□□□□ -1.01
LINC00641-201ENST00000555379 TRIM74Q86UV6 250 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 TRIM73Q86UV7 250 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 SIX5Q8N196 739 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 EXD1Q8NHP7 514 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 HIC2Q96JB3 615 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 PCSK1NQ9UHG2 260 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 CDH9Q9ULB4 789 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 CDY2AQ9Y6F7 541 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 CDY1Q9Y6F8 540 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 TTC26A0AVF1 554 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 C1QTNF3-AMACRE9PGA6 284 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 TADA3O75528 432 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 COL6A1P12109 1028 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 CCND1P24385 295 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 CTCFP49711 727 aaPredicted RBP8.71□□□□□ -1.01
LINC00641-201ENST00000555379 ARSEP51690 589 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 AGBL2Q5U5Z8 902 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 APOBEC3HQ6NTF7 200 aaKnown RBP8.71□□□□□ -1.01
LINC00641-201ENST00000555379 ZNF544Q6NX49 715 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 TRIM65Q6PJ69 517 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 POTEAQ6S8J7 498 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 ZNF467Q7Z7K2 595 aaPredicted RBP8.71□□□□□ -1.01
LINC00641-201ENST00000555379 PASD1Q8IV76 773 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 ZNF507Q8TCN5 953 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 HSFY1Q96LI6 401 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 OSBPL8Q9BZF1 889 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 VPS11Q9H270 941 aa8.71□□□□□ -1.01
LINC00641-201ENST00000555379 GTSE1Q9NYZ3 720 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms