RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PRPF3O43395 683 aaKnown RBP4.71□□□□□ -1.66
VTI1B-203ENST00000554636 EDIL3O43854 480 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 NBNO60934 754 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 ZNF623O75123 536 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 NPTXRO95502 500 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 FGBP02675 491 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 CXCL10P02778 98 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 ASLP04424 464 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 JMJD7P0C870 316 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 SMIM10L2AP0DMW4 78 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 SMIM10L2BP0DMW5 78 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 CKBP12277 381 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 SCG2P13521 617 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 PSMA5P28066 241 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 PDIA3P30101 505 aaKnown RBP4.71□□□□□ -1.66
VTI1B-203ENST00000554636 SREBF1P36956 1147 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 MRE11P49959 708 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 ADCY7P51828 1080 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 BFSP2Q13515 415 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 PCOLCEQ15113 449 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 STILQ15468 1287 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 ZMAT1Q5H9K5 638 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 GRAMD4Q6IC98 578 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 RUFY3Q7L099 469 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 DEFB128Q7Z7B8 93 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 RPUSD2Q8IZ73 545 aaKnown RBP4.71□□□□□ -1.66
VTI1B-203ENST00000554636 C7orf31Q8N865 590 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 CHST14Q8NCH0 376 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 OR14K1Q8NGZ2 314 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 CYP2W1Q8TAV3 490 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 Q8TCH9 128 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 CRYGNQ8WXF5 182 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 PHKBQ93100 1093 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 TIFAQ96CG3 184 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 IL17RAQ96F46 866 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 WWC2-AS2Q96NR7 200 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 PCYT2Q99447 389 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 CDX2Q99626 313 aaPredicted RBP4.71□□□□□ -1.66
VTI1B-203ENST00000554636 RNF26Q9BY78 433 aaPredicted RBP4.71□□□□□ -1.66
VTI1B-203ENST00000554636 TM6SF1Q9BZW5 370 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 SEC61A2Q9H9S3 476 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 TMEM260Q9NX78 707 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 Q9UFV3 132 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 FBXO10Q9UK96 956 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 MYRFQ9Y2G1 1151 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 ASB1Q9Y576 335 aa4.71□□□□□ -1.66
VTI1B-203ENST00000554636 WDR81Q562E7 1941 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 IGLV3-22A0A075B6J6 115 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 C17orf102A2RUQ5 167 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 SMCO2A6NFE2 343 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 GOLGA6L22H0YM25 854 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 DVL2O14641 736 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 MUSKO15146 869 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 MATN3O15232 486 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 BAIAP3O94812 1187 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 FOSP01100 380 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 ARP10275 920 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 MYOGP15173 224 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 IFNAR1P17181 557 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 TNFRSF1AP19438 455 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 SDHAP31040 664 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 TCF7P36402 384 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 SELENOPP49908 381 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 MECP2P51608 486 aaKnown RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 RABGGTBP53611 331 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 SLC6A3Q01959 620 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 SP4Q02446 784 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 ITGB3BPQ13352 177 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 MTMR1Q13613 665 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 CDSNQ15517 529 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 RAB30Q15771 203 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 FNDC3BQ53EP0 1204 aaKnown RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 SPDYAQ5MJ70 313 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 ZNF618Q5T7W0 954 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 UTP14CQ5TAP6 766 aaKnown RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 AGBL4Q5VU57 503 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 JAKMIP3Q5VZ66 844 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 CXXC5Q7LFL8 322 aaKnown RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 NIPA1Q7RTP0 329 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 RTN4RL1Q86UN2 441 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 SERINC5Q86VE9 423 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 FUKQ8N0W3 1084 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 CALML6Q8TD86 181 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 LMBR1Q8WVP7 490 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 CDHR1Q96JP9 859 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 SCYL1Q96KG9 808 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 MXRA8Q9BRK3 442 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 C1QTNF3Q9BXJ4 246 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 SLC26A6Q9BXS9 759 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 UPF3BQ9BZI7 483 aaKnown RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 ZMYND12Q9H0C1 365 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 MTIF3Q9H2K0 278 aaKnown RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 AGO4Q9HCK5 861 aaKnown RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 VPS54Q9P1Q0 977 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 PUF60Q9UHX1 559 aaKnown RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 ZNF215Q9UL58 517 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 NAP1L2Q9ULW6 460 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 COL4A4P53420 1690 aaPredicted RBP4.7□□□□□ -1.66
VTI1B-203ENST00000554636 NFASCO94856 1347 aa4.7□□□□□ -1.66
VTI1B-203ENST00000554636 EMSYQ7Z589 1322 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms