RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 KRT82Q9NSB4 513 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 ARMCX3Q9UH62 379 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-213ENST00000554508 CHORDC1Q9UHD1 332 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-213ENST00000554508 MAN1B1Q9UKM7 699 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 COQ4Q9Y3A0 265 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 OTOGLQ3ZCN5 2332 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 OTOL1A6NHN0 477 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-213ENST00000554508 LILRB5O75023 590 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 ATG13O75143 517 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 ZDHHC11BP0C7U3 371 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 MBL2P11226 248 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-213ENST00000554508 TDGF1P13385 188 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 ADORA2BP29275 332 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 TUBP50607 506 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 GALK1P51570 392 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 SLC5A3P53794 718 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 PMS1P54277 932 aaKnown RBP9.23□□□□□ -0.93
ACTN1-213ENST00000554508 MAP3K7CLP57077 242 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 ORC1Q13415 861 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 GAS6Q14393 721 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 FBXO43Q4G163 708 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 DCAF17Q5H9S7 520 aaPredicted RBP9.23□□□□□ -0.93
ACTN1-213ENST00000554508 TSSK4Q6SA08 328 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 ADGRG2Q8IZP9 1017 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 TTC16Q8NEE8 873 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 ZMIZ2Q8NF64 920 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 CCDC26Q8TAB7 109 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 SCAMP5Q8TAC9 235 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 WHAMMQ8TF30 809 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 SEMA4DQ92854 862 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 CD101Q93033 1021 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 CEP63Q96MT8 703 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 TWNKQ96RR1 684 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 P2RY13Q9BPV8 354 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 LINC00597Q9H2U6 94 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 PNPLA8Q9NP80 782 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.23□□□□□ -0.932e-13■■■■■ 158.6
ACTN1-213ENST00000554508 TLR8Q9NR97 1041 aaKnown RBP9.23□□□□□ -0.93
ACTN1-213ENST00000554508 RBM12Q9NTZ6 932 aaKnown RBP9.23□□□□□ -0.93
ACTN1-213ENST00000554508 FAM49BQ9NUQ9 324 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 TBC1D14Q9P2M4 693 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 HMGXB4Q9UGU5 601 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 CPQQ9Y646 472 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 WNT6Q9Y6F9 365 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 KIAA1549LQ6ZVL6 1849 aa9.23□□□□□ -0.93
ACTN1-213ENST00000554508 E2F8A0AVK6 867 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 BICDL2A1A5D9 508 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 TRIM49BA6NDI0 452 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CHURC1-FNTBB4DL54 471 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 PPP1R3GB7ZBB8 358 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 PMM2O15305 246 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 BEST1O76090 585 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 GNA14O95837 355 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CD44P16070 742 aaKnown RBP9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CD58P19256 250 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 HOXA6P31267 233 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CNR2P34972 360 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 PSEN1P49768 467 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 YWHAEP62258 255 aaKnown RBP9.22□□□□□ -0.93
ACTN1-213ENST00000554508 ZXDBP98169 803 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 SATB1Q01826 763 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 MORC3Q14149 939 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CAMK4Q16566 473 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CBWD6Q4V339 395 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CBWD3Q5JTY5 395 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CBWD5Q5RIA9 395 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 ISM2Q6H9L7 571 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 FSTL4Q6MZW2 842 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 Q6ZS52 159 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CLEC20AQ6ZU45 233 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 SUMF1Q8NBK3 374 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 RUBCNQ92622 972 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 TATDN2Q93075 761 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 OTUB2Q96DC9 234 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CHFRQ96EP1 664 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 TMEM176AQ96HP8 235 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 HEXIM2Q96MH2 286 aaKnown RBP9.22□□□□□ -0.93
ACTN1-213ENST00000554508 DUSP9Q99956 384 aaKnown RBP9.22□□□□□ -0.93
ACTN1-213ENST00000554508 DUSP16Q9BY84 665 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 UBXN6Q9BZV1 441 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 EPC1Q9H2F5 836 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 CISHQ9NSE2 258 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 SCML2Q9UQR0 700 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 GVINP1Q7Z2Y8 2422 aa9.22□□□□□ -0.93
ACTN1-213ENST00000554508 EML5Q05BV3 1969 aa9.21□□□□□ -0.93
ACTN1-213ENST00000554508 CCDC163A0A0D9SF12 145 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 HHLA1C9JL84 531 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 K7ESF4 209 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 P4HA2O15460 535 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 COCHO43405 550 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 TLR5O60602 858 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 EGFP01133 1207 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 ACO1P21399 889 aaKnown RBP9.21□□□□□ -0.94
ACTN1-213ENST00000554508 TBXAS1P24557 533 aaPredicted RBP9.21□□□□□ -0.94
ACTN1-213ENST00000554508 ATP5C1P36542 298 aaKnown RBP9.21□□□□□ -0.94
ACTN1-213ENST00000554508 FMO5P49326 533 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 CETN1Q12798 172 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 CUL2Q13617 745 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 ZNF394Q53GI3 561 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 PPP1R26Q5T8A7 1209 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms