RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 LAMTOR4Q0VGL1 99 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 STK4Q13043 487 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 CAPSQ13938 189 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TRIM71Q2Q1W2 868 aaKnown RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 FAM26FQ5R3K3 315 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 ODR4Q5SWX8 454 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 ZNF658Q5TYW1 1059 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 SLC39A5Q6ZMH5 540 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 EPM2AIP1Q7L775 607 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 UBE2Q1Q7Z7E8 422 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 ZNF605Q86T29 641 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 RPAINQ86UA6 219 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 SERINC5Q86VE9 423 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 MYCT1Q8N699 235 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TRIML1Q8N9V2 468 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TMEM161BQ8NDZ6 487 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 DNAJB3Q8WWF6 145 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 PSPC1Q8WXF1 523 aaKnown RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TRMT2BQ96GJ1 504 aaKnown RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TMEM169Q96HH4 297 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 PAWRQ96IZ0 340 aaKnown RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 IFT74Q96LB3 600 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 MAGEB10Q96LZ2 347 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 KIFC3Q9BVG8 833 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 STRA6Q9BX79 667 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 FAM49AQ9H0Q0 323 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TRPV6Q9H1D0 765 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 C17orf75Q9HAS0 396 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 RXFP1Q9HBX9 757 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 SLC39A2Q9NP94 309 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 OLFML3Q9NRN5 406 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TRMT13Q9NUP7 481 aaKnown RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 RMND1Q9NWS8 449 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 LARSQ9P2J5 1176 aaKnown RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TNPO3Q9Y5L0 923 aaKnown RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 HCFC2Q9Y5Z7 792 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 ADGRA3Q8IWK6 1321 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 ALPK3Q96L96 1907 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 MKI67P46013 3256 aaKnown RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 A0A1W2PQC6 194 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 CCDC169A6NNP5 214 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 SLC16A4O15374 487 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 ASAP2O43150 1006 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 GPR32O75388 356 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 CD4P01730 458 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 MED14OSP0DP75 135 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 CAPN2P17655 700 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 GLDCP23378 1020 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 HOXD13P35453 343 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 ARL4AP40617 200 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 PRCPP42785 496 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 NCKAP1LP55160 1127 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 PAK1Q13153 545 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 DMP1Q13316 513 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 MXD4Q14582 209 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 PPP2R5AQ15172 486 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 PTGISQ16647 500 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 DPCR1Q3MIW9 517 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 COBLL1Q53SF7 1204 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 HABP4Q5JVS0 413 aaKnown RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 CDCA2Q69YH5 1023 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 BICRALQ6AI39 1079 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 TAF2Q6P1X5 1199 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 SASS6Q6UVJ0 657 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 ATG14Q6ZNE5 492 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 C11orf57Q6ZUT1 292 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 ZNF720Q7Z2F6 126 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 MTDHQ86UE4 582 aaKnown RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 RHPN2Q8IUC4 686 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 FAM126BQ8IXS8 530 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 SCFD1Q8WVM8 642 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 CCDC47Q96A33 483 aaKnown RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 ZNF668Q96K58 619 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 MAP7D2Q96T17 732 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 NTPCRQ9BSD7 190 aaKnown RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 SEZ6LQ9BYH1 1024 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 ST6GALNAC4Q9H4F1 302 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 MRPL44Q9H9J2 332 aaKnown RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 KLHL14Q9P2G3 628 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 ARHGAP28Q9P2N2 729 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 PLAAQ9Y263 795 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 SIT1Q9Y3P8 196 aa6.88□□□□□ -1.31
SCFD1-212ENST00000554486 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-212ENST00000554486 ZMYM2Q9UBW7 1377 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 A0A087WZ62 844 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 LRRIQ4A6NIV6 560 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 K7ENM7 598 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 ETV2O00321 342 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 EIF3DO15371 548 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 SEMA7AO75326 666 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 PRPF6O94906 941 aaKnown RBP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 GCNT3O95395 438 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 IQCF3P0C7M6 154 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 SRGAP2CP0DJJ0 459 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 CCDC192P0DO97 292 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 GPC3P51654 580 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 NLRP11P59045 1033 aaKnown RBP6.87□□□□□ -1.31
SCFD1-212ENST00000554486 PTENP60484 403 aa6.87□□□□□ -1.31
SCFD1-212ENST00000554486 MRPS6P82932 125 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms