RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 PTPN13Q12923 2485 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 F5P12259 2224 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 MYO9AB2RTY4 2548 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 CACNA1EQ15878 2313 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 SMIM35A0A1B0GVV1 85 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 HMMRO75330 724 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 RHOBTB1O94844 696 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 RECKO95980 971 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 EPHX1P07099 455 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 GALTP07902 379 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 CCNE1P24864 410 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 ABCG1P45844 678 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 GIPRP48546 466 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 SLC11A1P49279 550 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 HSD17B4P51659 736 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 CFHR1Q03591 330 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 GPATCH4Q5T3I0 446 aaKnown RBP6.35□□□□□ -1.39
ATXN3-226ENST00000554350 NT5DC1Q5TFE4 455 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 MTHFD1LQ6UB35 978 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 Q6ZS52 159 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 FAM43BQ6ZT52 329 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-226ENST00000554350 STOX1Q6ZVD7 989 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 ADGRF4Q8IZF3 695 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 ARHGEF39Q8N4T4 335 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 ITFG1Q8TB96 612 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 SEPT1Q8WYJ6 367 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 ALG3Q92685 438 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 DNASE1L2Q92874 299 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 RNF34Q969K3 372 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 OSBP2Q969R2 916 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 AZI2Q9H6S1 392 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 NRDE2Q9H7Z3 1164 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 DNAJB4Q9UDY4 337 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 CGGBP1Q9UFW8 167 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-226ENST00000554350 SSX2IPQ9Y2D8 614 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 DUSP10Q9Y6W6 482 aa6.35□□□□□ -1.39
ATXN3-226ENST00000554350 CAPN8A6NHC0 703 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 M0R2C6 588 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 EPB41L2O43491 1005 aaKnown RBP6.34□□□□□ -1.39
ATXN3-226ENST00000554350 NOBOXO60393 691 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 CHRNB1P11230 501 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 KLRC1P26715 233 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 CRYBB1P53674 252 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-226ENST00000554350 PLP2Q04941 152 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 SPATS1Q496A3 300 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 NOMO2Q5JPE7 1267 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 ANKRD45Q5TZF3 282 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 GLB1LQ6UWU2 654 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 FERMT3Q86UX7 667 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 LZTR1Q8N653 840 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 C19orf47Q8N9M1 422 aaKnown RBP6.34□□□□□ -1.39
ATXN3-226ENST00000554350 GIMAP8Q8ND71 665 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-226ENST00000554350 CPA5Q8WXQ8 436 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 APPBP2Q92624 585 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 MCRS1Q96EZ8 462 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 SCLT1Q96NL6 688 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 FAM193BQ96PV7 902 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-226ENST00000554350 RPS6KC1Q96S38 1066 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 PLA2G2FQ9BZM2 168 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 PLEKHA4Q9H4M7 779 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 C2orf42Q9NWW7 574 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 GULP1Q9UBP9 304 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 STK39Q9UEW8 545 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 EFR3BQ9Y2G0 817 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 FAN1Q9Y2M0 1017 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 LAMA5O15230 3695 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 MYH6P13533 1939 aa6.34□□□□□ -1.39
ATXN3-226ENST00000554350 FREM2Q5SZK8 3169 aa6.34□□□□□ -1.4
ATXN3-226ENST00000554350 SPTAN1Q13813 2472 aaKnown RBP6.34□□□□□ -1.4
ATXN3-226ENST00000554350 DOCK6Q96HP0 2047 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 ASCC3Q8N3C0 2202 aaKnown RBP6.33□□□□□ -1.4
ATXN3-226ENST00000554350 DOPEY1Q5JWR5 2465 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 GSTTP1A0A1W2PQM5 241 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 BCLAF3A2AJT9 711 aaKnown RBP6.33□□□□□ -1.4
ATXN3-226ENST00000554350 FAM221BA6H8Z2 402 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 PATE3B3GLJ2 98 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 GCOM1H8Y6P7 765 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-226ENST00000554350 CDX4O14627 284 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-226ENST00000554350 CCL16O15467 120 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 TGM5O43548 720 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 ECI2O75521 394 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 STAM2O75886 525 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 PAPSS2O95340 614 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-226ENST00000554350 VTNP04004 478 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 POLR2MP0CAP2 368 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 GLUD2P49448 558 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 MRPS9P82933 396 aaKnown RBP6.33□□□□□ -1.4
ATXN3-226ENST00000554350 DPY19L1Q2PZI1 675 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 PLK5Q496M5 336 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 PPM1LQ5SGD2 360 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 LIN9Q5TKA1 542 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 MBLAC2Q68D91 279 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 CEP85Q6P2H3 762 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 CPNE8Q86YQ8 564 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 CARFQ8N187 725 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 METTL13Q8N6R0 699 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 NETO2Q8NC67 525 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 SMARCC2Q8TAQ2 1214 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 HDAC7Q8WUI4 952 aa6.33□□□□□ -1.4
ATXN3-226ENST00000554350 LPPQ93052 612 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms