RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 C7orf25Q9BPX7 421 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 ZFYVE21Q9BQ24 234 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 YIPF4Q9BSR8 244 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 PANK2Q9BZ23 570 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 SMOC1Q9H4F8 434 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 C11orf49Q9H6J7 331 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 C17orf75Q9HAS0 396 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 ATP6V0A4Q9HBG4 840 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 PCDH18Q9HCL0 1135 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 SETD4Q9NVD3 440 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 DACT1Q9NYF0 836 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 MYOTQ9UBF9 498 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 HDAC6Q9UBN7 1215 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 TUBE1Q9UJT0 475 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 ODF2LQ9ULJ1 636 aa6.32□□□□□ -1.4
SCAF11-213ENST00000550629 SCN10AQ9Y5Y9 1956 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 PHLPP2Q6ZVD8 1323 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 DOCK5Q9H7D0 1870 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 PVALEFA0A1B0GWK0 134 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 TMEM150BA6NC51 233 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 ASAP2O43150 1006 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 SMC2O95347 1197 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 KRT18P05783 430 aaKnown RBP6.31□□□□□ -1.4
SCAF11-213ENST00000550629 GAP43P17677 238 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 GRK2P25098 689 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 KLRC1P26715 233 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 THBS2P35442 1172 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 GRK3P35626 688 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 SARSP49591 514 aaKnown RBP6.31□□□□□ -1.4
SCAF11-213ENST00000550629 ZNF131P52739 623 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 POU5F1BQ06416 359 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 EFEMP1Q12805 493 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 POSTNQ15063 836 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 PPP2R5AQ15172 486 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 PTGISQ16647 500 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 KIZQ2M2Z5 673 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 KLHL40Q2TBA0 621 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 FAM47CQ5HY64 1035 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 NT5DC1Q5TFE4 455 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 FOXB2Q5VYV0 432 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 SLC39A5Q6ZMH5 540 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 RSPH3Q86UC2 560 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 LINC01465Q8N7H1 131 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 KYQ8NBH2 561 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 SLC17A8Q8NDX2 589 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 LRRC15Q8TF66 581 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 PSPC1Q8WXF1 523 aaKnown RBP6.31□□□□□ -1.4
SCAF11-213ENST00000550629 SYAP1Q96A49 352 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-213ENST00000550629 TOE1Q96GM8 510 aaKnown RBP6.31□□□□□ -1.4
SCAF11-213ENST00000550629 PAGE5Q96GU1 130 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 PAWRQ96IZ0 340 aaKnown RBP6.31□□□□□ -1.4
SCAF11-213ENST00000550629 MAP7D2Q96T17 732 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 PLIN2Q99541 437 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 CDC6Q99741 560 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 NTPCRQ9BSD7 190 aaKnown RBP6.31□□□□□ -1.4
SCAF11-213ENST00000550629 TRIM9Q9C026 710 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 SENP6Q9GZR1 1112 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-213ENST00000550629 CLSTN2Q9H4D0 955 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 SLC6A20Q9NP91 592 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
SCAF11-213ENST00000550629 DTLQ9NZJ0 730 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 NTMQ9P121 344 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 SEL1LQ9UBV2 794 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 COL4A3BPQ9Y5P4 624 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 LOXHD1Q8IVV2 1947 aa6.31□□□□□ -1.4
SCAF11-213ENST00000550629 FRMD3A2A2Y4 597 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 FAM221BA6H8Z2 402 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 MYMKA6NI61 221 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 H0YCG3 227 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 KRIT1O00522 736 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 USO1O60763 962 aaKnown RBP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 TBCAO75347 108 aaKnown RBP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 PARNO95453 639 aaKnown RBP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 CD4P01730 458 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 FAM153BP0C7A2 387 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 CYP2C9P11712 490 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 EN2P19622 333 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 ARL2P36404 184 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 NAMPTP43490 491 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 EFNA5P52803 228 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 IGBP1P78318 339 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 MAPK7Q13164 816 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 ALCAMQ13740 583 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 GIT2Q14161 759 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 TFDP1Q14186 410 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 KCNB1Q14721 858 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 RTP5Q14D33 572 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 PCBP1Q15365 356 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCAF11-213ENST00000550629 FAM209AQ5JX71 171 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 FAM102BQ5T8I3 360 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 EFCAB12Q6NXP0 572 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 TEPPQ6URK8 271 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 OTOP3Q7RTS5 596 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 ZNF410Q86VK4 478 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 SCUBE1Q8IWY4 988 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 CCDC65Q8IXS2 484 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 KIAA0319LQ8IZA0 1049 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 SPATA20Q8TB22 786 aa6.3□□□□□ -1.4
SCAF11-213ENST00000550629 CAGE1Q8TC20 777 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms