RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 ITGA7Q13683 1181 aa21.93■■□□□ 1.1
PRDM4-205ENST00000550376 PPP6R3Q5H9R7 873 aaPredicted RBP21.93■■□□□ 1.1
PRDM4-205ENST00000550376 PAQR9Q6ZVX9 377 aa21.93■■□□□ 1.1
PRDM4-205ENST00000550376 SYDE1Q6ZW31 735 aaPredicted RBP21.93■■□□□ 1.1
PRDM4-205ENST00000550376 PIGZQ86VD9 579 aa21.93■■□□□ 1.1
PRDM4-205ENST00000550376 DDX43Q9NXZ2 648 aaKnown RBP21.93■■□□□ 1.1
PRDM4-205ENST00000550376 COX16Q9P0S2 106 aa21.93■■□□□ 1.1
PRDM4-205ENST00000550376 ALDH1A1P00352 501 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 MYCP01106 439 aaPredicted RBP21.92■■□□□ 1.1
PRDM4-205ENST00000550376 PTPN1P18031 435 aaKnown RBP21.92■■□□□ 1.1
PRDM4-205ENST00000550376 HDAC4P56524 1084 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 NOGQ13253 232 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 LPIN1Q14693 890 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 UNC45BQ8IWX7 931 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 ADAM2Q99965 735 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 RHOBTB2Q9BYZ6 727 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 TRPV6Q9H1D0 765 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 HMGB1P1B2RPK0 211 aaPredicted RBP21.92■■□□□ 1.1
PRDM4-205ENST00000550376 LRPAP1P30533 357 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 PCK1P35558 622 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 BCAT1P54687 386 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 PITX1P78337 314 aaPredicted RBP21.92■■□□□ 1.1
PRDM4-205ENST00000550376 SLMAPQ14BN4 828 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 LONRF1Q17RB8 773 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 LIMS2Q7Z4I7 341 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 FAM71DQ8N9W8 422 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 SLC35B2Q8TB61 432 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 MED10Q9BTT4 135 aa21.92■■□□□ 1.1
PRDM4-205ENST00000550376 GPR182O15218 404 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 BANF1O75531 89 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 IL4RP24394 825 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 ACTN2P35609 894 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 MAP3K7CLP57077 242 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 ADIGQ0VDE8 80 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 DPYSL3Q14195 570 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 DEFB115Q30KQ5 88 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 CCDC38Q502W7 563 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 BBS12Q6ZW61 710 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 FAM149B1Q96BN6 582 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 KCNK16Q96T55 309 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 TMPRSS4Q9NRS4 437 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 MYBPHLA2RUH7 354 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 NUDT17P0C025 328 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 PTPN7P35236 360 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 KRT81Q14533 505 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 CAPN12Q6ZSI9 719 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 MAK16Q9BXY0 300 aaKnown RBP21.91■■□□□ 1.1
PRDM4-205ENST00000550376 FAM124BQ9H5Z6 455 aaPredicted RBP21.91■■□□□ 1.1
PRDM4-205ENST00000550376 CRTAC1Q9NQ79 661 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 TMEM30AQ9NV96 361 aa21.91■■□□□ 1.1
PRDM4-205ENST00000550376 CACNA2D1P54289 1103 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 HTRA3P83110 453 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 ZSCAN26Q16670 478 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 DSTYKQ6XUX3 929 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 NETO2Q8NC67 525 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 MDM1Q8TC05 714 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 SPATA18Q8TC71 538 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 SNRNP25Q9BV90 132 aaKnown RBP21.9■■□□□ 1.1
PRDM4-205ENST00000550376 HEY1Q9Y5J3 304 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 PDCD11Q14690 1871 aaKnown RBP21.9■■□□□ 1.1
PRDM4-205ENST00000550376 BRCC3P46736 316 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 HNRNPH2P55795 449 aaKnown RBP21.9■■□□□ 1.1
PRDM4-205ENST00000550376 FASTKD3Q14CZ7 662 aaKnown RBP21.9■■□□□ 1.1
PRDM4-205ENST00000550376 TAZQ16635 292 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 HIBCHQ6NVY1 386 aaPredicted RBP21.9■■□□□ 1.1
PRDM4-205ENST00000550376 TOP6BLQ8N6T0 577 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 NKD2Q969F2 451 aaPredicted RBP21.9■■□□□ 1.1
PRDM4-205ENST00000550376 TNIP3Q96KP6 325 aa21.9■■□□□ 1.1
PRDM4-205ENST00000550376 WARSP23381 471 aaKnown RBP21.89■■□□□ 1.09
PRDM4-205ENST00000550376 ACLYP53396 1101 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 EIF3EP60228 445 aaKnown RBP21.89■■□□□ 1.09
PRDM4-205ENST00000550376 TIGD5Q53EQ6 642 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 KDM7AQ6ZMT4 941 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 CTNNAL1Q9UBT7 734 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 B3GAT3O94766 335 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 ITGAVP06756 1048 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 SETSIPP0DME0 302 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 ACAP1Q15027 740 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 DRICH1Q6PGQ1 229 aaPredicted RBP21.89■■□□□ 1.09
PRDM4-205ENST00000550376 LEKR1Q6ZMV7 388 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 PYROXD2Q8N2H3 581 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 RBM15Q96T37 977 aaKnown RBP eCLIP21.89■■□□□ 1.09
PRDM4-205ENST00000550376 SRRDQ9UH36 339 aa21.89■■□□□ 1.09
PRDM4-205ENST00000550376 DRG1Q9Y295 367 aaKnown RBP21.89■■□□□ 1.09
PRDM4-205ENST00000550376 ITGB1P05556 798 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 RBP3P10745 1247 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 YY1P25490 414 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 ANKRD22Q5VYY1 191 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 HFE2Q6ZVN8 426 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 CCDC185Q8N715 623 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 TBCBQ99426 244 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 DUSP16Q9BY84 665 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 CHST12Q9NRB3 414 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 NINJ2Q9NZG7 142 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 LMNB2Q03252 620 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 FAM131BQ86XD5 332 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 DEFB106AQ8N104 65 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 RAET1EQ8TD07 263 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 STK32AQ8WU08 396 aa21.88■■□□□ 1.09
PRDM4-205ENST00000550376 RSAD2Q8WXG1 361 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms