RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 SLFN11Q7Z7L1 901 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 GRAMD1AQ96CP6 724 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 TJP2Q9UDY2 1190 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 SLC39A10Q9ULF5 831 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 DOT1LQ8TEK3 1739 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 STRNO43815 780 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 LCA5LO95447 670 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 JCHAINP01591 159 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 HMGCRP04035 888 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 PNPLA4P41247 253 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 JAM2P57087 298 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 ASTE1Q2TB18 679 aaPredicted RBP15.58■□□□□ 0.08
CUX1-214ENST00000550008 DUPD1Q68J44 220 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 ZNF512Q96ME7 567 aaPredicted RBP15.58■□□□□ 0.08
CUX1-214ENST00000550008 TINF2Q9BSI4 451 aa15.58■□□□□ 0.08
CUX1-214ENST00000550008 SOWAHBA6NEL2 793 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 RBL1P28749 1068 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 DEFB106AQ8N104 65 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 TRIM56Q9BRZ2 755 aaKnown RBP15.57■□□□□ 0.08
CUX1-214ENST00000550008 MANSC1Q9H8J5 431 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 PCDH9Q9HC56 1237 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 SLC40A1Q9NP59 571 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 VTA1Q9NP79 307 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 KIAA1257Q9ULG3 409 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 KPNA7A9QM74 516 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 XPAP23025 273 aaPredicted RBP15.57■□□□□ 0.08
CUX1-214ENST00000550008 FSTL1Q12841 308 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 PPIL2Q13356 520 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 GLT1D1Q96MS3 346 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 GOLGA2P5Q9HBQ8 144 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 ITGA11Q9UKX5 1188 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 ADGRA3Q8IWK6 1321 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 ZBBXA8MT70 800 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 PYGBP11216 843 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 MFSD10Q14728 455 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 IQCKQ8N0W5 287 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 CDC26Q8NHZ8 85 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 LENG1Q96BZ8 264 aaPredicted RBP15.57■□□□□ 0.08
CUX1-214ENST00000550008 PGLYRP2Q96PD5 576 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 GPR20Q99678 358 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 ZBED2Q9BTP6 218 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 LOC102724159A0A0B4J2E5 919 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 DDX3YO15523 660 aaKnown RBP15.57■□□□□ 0.08
CUX1-214ENST00000550008 UBOX5O94941 541 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 ATXN8OSP0DMR3 200 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 ATICP31939 592 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 RAD23BP54727 409 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 SP2Q02086 613 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 ZNF268Q14587 947 aaPredicted RBP15.57■□□□□ 0.08
CUX1-214ENST00000550008 PWP2Q15269 919 aaKnown RBP15.57■□□□□ 0.08
CUX1-214ENST00000550008 KIF19Q2TAC6 998 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 C12orf56Q8IXR9 622 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 GBP5Q96PP8 586 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 PRDM5Q9NQX1 630 aaPredicted RBP15.57■□□□□ 0.08
CUX1-214ENST00000550008 MID2Q9UJV3 735 aa15.57■□□□□ 0.08
CUX1-214ENST00000550008 MYH10P35580 1976 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 KBTBD13C9JR72 458 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 TPH1P17752 444 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 BST2Q10589 180 aaKnown RBP15.56■□□□□ 0.08
CUX1-214ENST00000550008 FOXD4Q12950 439 aaPredicted RBP15.56■□□□□ 0.08
CUX1-214ENST00000550008 LRRC36Q1X8D7 754 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 PTPRN2Q92932 1015 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 B3GNT5Q9BYG0 378 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 TASP1Q9H6P5 420 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 MROH7Q68CQ1 1323 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 NUP188Q5SRE5 1749 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 BTNL10A8MVZ5 291 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 DCDC2CA8MYV0 355 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 ABCG1P45844 678 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 KPNA2P52292 529 aaKnown RBP15.56■□□□□ 0.08
CUX1-214ENST00000550008 CRADDP78560 199 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.56■□□□□ 0.08
CUX1-214ENST00000550008 TNFSF13BQ9Y275 285 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 TRPA1O75762 1119 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 KDELR1P24390 212 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 PTPN20Q4JDL3 420 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 MAP3K21Q5TCX8 1036 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 KATNAL2Q8IYT4 538 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 EFHBQ8N7U6 833 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 TTC8Q8TAM2 541 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 SLITRK1Q96PX8 696 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 DHX33Q9H6R0 707 aaKnown RBP15.56■□□□□ 0.08
CUX1-214ENST00000550008 APOBEC3GQ9HC16 384 aaKnown RBP15.56■□□□□ 0.08
CUX1-214ENST00000550008 HAO1Q9UJM8 370 aa15.56■□□□□ 0.08
CUX1-214ENST00000550008 GOLGA8TH3BQL2 631 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 TRAPPC3O43617 180 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 POLBP06746 335 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 IRF1P10914 325 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 GLRBP48167 497 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 ZC3H12AQ5D1E8 599 aaKnown RBP15.55■□□□□ 0.08
CUX1-214ENST00000550008 CD302Q8IX05 232 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 GMLQ99445 158 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 SYT15Q9BQS2 421 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.55■□□□□ 0.08
CUX1-214ENST00000550008 PRRC2BQ5JSZ5 2229 aaKnown RBP15.55■□□□□ 0.08
CUX1-214ENST00000550008 TGM2P21980 687 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 PAPOLAP51003 745 aaKnown RBP15.55■□□□□ 0.08
CUX1-214ENST00000550008 KCNT2Q6UVM3 1135 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 LONP2Q86WA8 852 aa15.55■□□□□ 0.08
CUX1-214ENST00000550008 E2F7Q96AV8 911 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms